Gene Shewmr4_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2313 
Symbol 
ID4252884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2759644 
End bp2760171 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content51% 
IMG OID638118938 
Producthypothetical protein 
Protein accessionYP_734441 
Protein GI113970648 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.352653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA ATCCTGATTT TTTTCCGCTG ACTCAAATGG CGCAGCGATT TGTCGATCAG 
CTCGCCCAGT GCCGTCGCTT AGGGTTAACC GTGCTCGAAG CCAGTGAGCA CCACGTACTG
ATTGAGTTGC CCTATAGCAC TGAGTTAATT GGTTATCCCG ATACGGGTGT TATCCACGGC
GGGGTGATAA CCACCCTGAT GGACACCGCC TGTGGCAGCG CGGTGGTGAG TGCGATTTTT
CAAAAATATC AATCCTTAGA AATTTCGCCC ACCCTCGACT TACGGGTCGA TTATATGAAG
CCCGCCCAGC CCCATAAGCC AGTTTATGGC TTTGCGGAAT GCTATAAGTT GTCATCTAAT
ATCGCCTTTA CCCGCGCCAT CGCCTATCAG GACAGCATCG ATGATCCTAT CGCCCATGCG
GTGGGCTCTT TTATGCGGAT CAGCCCCGAA ATGGTGGGCG ATGCATTTAG ACAAGCCTTG
ATGGGAGAAG CCGTGCCGCC CTTAGGAGAG ACAGATGAAC TCAAATAA
 
Protein sequence
MKVNPDFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG 
GVITTLMDTA CGSAVVSAIF QKYQSLEISP TLDLRVDYMK PAQPHKPVYG FAECYKLSSN
IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL MGEAVPPLGE TDELK