Gene Shewmr4_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2294 
Symbol 
ID4252865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2736699 
End bp2737262 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID638118919 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_734422 
Protein GI113970629 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0503645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA AGCAAAAAAT GTTGGCGGGT GAACCCTATC AAGCCTGCGA TGAAACCTTA 
TTAGCCGAAA GAATGCGGGC TAAATTAATG TGTCATCAAT TTAATCATGC CGACCCTACC
CAGCTTGAGG CGTGTATGGC CCACTTGCGC GAGCTACTCA ATGTGCCTAG TTGTGCCCAT
ATCGAGCCTA ACTTCTTTTG TGATTACGGC TATAACATCC AAATTGGCCA GCAATTTTAT
GCGAATCACA ACTTAACCAT ACTCGACGTT TGTCAGGTCA CGATTGGCAA CCATGTGATG
TTTGGGCCCA ATGTACTGAT TTCTACTGCG ACCCATCCTA TTGACCCCAT TGCTCGTCTT
ACAACAGAAT TTGGTAAGCC TATTCATATT GGTCACCATG TGTGGCTCGG CGGTAATGTC
AGTGTATTGC CCGGTGTCAC CATTGGCGAT AACTGCGTGA TTGGCGCGGG CAGTGTGGTG
AATAAAGATA TTCCAGCCAA TAGTGTGGCT GTGGGTAATC CTTGTAGGGT GATTAAGCAA
ATCACTACAC CTAACGCGGA CTAA
 
Protein sequence
MTEKQKMLAG EPYQACDETL LAERMRAKLM CHQFNHADPT QLEACMAHLR ELLNVPSCAH 
IEPNFFCDYG YNIQIGQQFY ANHNLTILDV CQVTIGNHVM FGPNVLISTA THPIDPIARL
TTEFGKPIHI GHHVWLGGNV SVLPGVTIGD NCVIGAGSVV NKDIPANSVA VGNPCRVIKQ
ITTPNAD