| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2275 |
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| Symbol | |
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| ID | 4252846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2719426 |
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| End bp | 2720094 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118900 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_734403 |
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| Protein GI | 113970610 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT TTCAATCACA TTTAGCGCAA AATCGCTATG ATAGGCAGTT ATCACCTCCT
ATCGACATGG CTATGGAAAA CGATAGCACT ATTTCAACCG CCAATGAGCT AATCACAGAT
CCCGATCCTT TGGCTCGTGC CATTGCTAAG GTTGCAAATC AAAGGGATAA AGCAGCCTTT
GCTGAGCTGT TTAACCACTT TATGCCCAAA ATTCGCGCAT TCGGTCTGCA AAGATTAAAT
CAACAGGGTC TTGCTATGGA TCTGGTACAA GAAACCATGA CCCTAGTTTG GACCAAGGCC
CATTTATACA ATGCGGACAA AGGGTCGGTG GCGACCTGGG TATTTACCAT TATGCGTAAT
CAGTGTTTCG ATATGCTAAG ACGGGTACAG CATAATCGAG AGGATGCTTT CGGTGACGAT
ATCTGGCCAC TTTGCGATGT TGCCGTTAGC CAAGAGAACA ACACCGACCA TAAATTGACT
GCCAAACTAC TCGCACATTT AGATGCCCTG CCCCTACCTC AACGCCAAGT GGTGCAAGGG
ATCTATATGC AAGAACTCAC GCAACAAGAA TTAGCCGATG CCTTAAAAGT CCCGATTGGC
ACGATAAAAT CGCGACTCAG ATTGGGGTTA GAAAAGCTGA AAAGCTTTTT GGAGACACAA
CATGATTAA
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| Protein sequence | MENFQSHLAQ NRYDRQLSPP IDMAMENDST ISTANELITD PDPLARAIAK VANQRDKAAF
AELFNHFMPK IRAFGLQRLN QQGLAMDLVQ ETMTLVWTKA HLYNADKGSV ATWVFTIMRN
QCFDMLRRVQ HNREDAFGDD IWPLCDVAVS QENNTDHKLT AKLLAHLDAL PLPQRQVVQG
IYMQELTQQE LADALKVPIG TIKSRLRLGL EKLKSFLETQ HD
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