| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2264 |
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| Symbol | ushA |
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| ID | 4252835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2707704 |
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| End bp | 2709425 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118889 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_734392 |
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| Protein GI | 113970599 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.96145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA AGCTTATTAA AGGATTAATT GCGACTGCAG TGCTTGCTGC GCTAGCAGGT
TGTAATAGTG ATGATGATAA TACTAAAGTA CCAACAACCT GTGCCGAAGC GGGCAGCGCT
TGTAAAACAT TTACCGTATT ACACACCAAC GATAACCATG GCCGTTTCTG GGAAAACAGT
GATGGCGAAT ATGGTATGGC GGCTCGTAAA GCCCTAGTCG ATCAAATTCG CGCTGAAGTC
AGCAAGAATG GCGGCCAAAC ATTATTATTA TCTGGCGGTG ATATTAACAC TGGCGTACCA
GAATCTGATT TACAAGATGC GATTCCTGAC TTTACTGGTA TGAACAAAAT TGGTTACGAC
GCAATGGCAG TCGGTAACCA TGAATTCGAT AACCCATTAT CTGTTTTAGA TATGCAGCGT
CGTTTAGCCG AATTCCCAAT GCTGGCGGCA AACATTTACC GTAAAAACGC TGAGGGTGGT
CAAGGTGAAC GTTATTTCGA GCCTTACAAA GTGTTCGATA TTAACGGTCT TAAAGTGGCT
GTGATTGGTT TAACCACCGA AGACACTGCA AAAATCGGTA ACCCAGAATT TATCAGCGAT
TTGATTTTCA CCGATCCTAA AGTGGAAGTG GCGAAAGTTA TCAAAGAAAT TAAAGACGCC
AAAGCGGCTG ATGTGATCTT CGCAACGACT CATATGGGTC ACTATGCCGA CGGTCAAAAC
GGTAGCAACG CCCCAGGCGA TGTGGCAATG GCGCGTGCGT TAAATAAAGG CGACTTACAA
GTTGTTATCG GTGGTCACTC ACAAAACCCA GTGTGTATGG AACCGGGTAC TGACAACAAG
TCTTACGCCG ACTTCAAACC TGGTGATGAT TGCGCGCCAG ACCAACAAAA CGGCACTTGG
ATCATGCAAG CCCACGAATG GGGTAAGTAT GTTGGCCGTG CGGATTTCGA ATACTTCAAT
GGCGAACTGC ACTTAGCTAG CTACAAGCTG ATCCCTGTGA ACATGCGTAA GCTGGACGAA
GCAGGCAAGA AAACCACTGA GCTGGCTGGC ACTAAGATTG AGCCAGATGC TGAGTTAAAA
GAGCTGCTGT CTTACTACCA AGAGAAAGGC CAAGCTAAGT TAGACGAAGT GATTGCGACT
ACCGATGCGT TGCTCGACGG TGAACGTGCA AACGTACGTA ACAAGCAAAC CAACTTAGGC
CGCATGTTAG CCATGGCGCA AAGCGGTAAA GTGTCTGCTG ACTTTGGTGT AATGAACTCA
GGTGGTGTGC GCGCTTCTAT TCAAGCTGGC GACATTACTT ACCGTGACGT GCTGACGGTT
CAACCTTTCG GCAACATGGT GACCCTGAAC GAAATGACAG GTACTGAAGT CGCGGCTTAC
TTAGGCGCTG TGGGCAGTAT CCAAATCGGT TCGGGTGGTT ATGCGCAGAT CACTGGCGTG
AAAATGACCA TCGACTGTGT GGCCAAGACG GCTAATATCA GCGAAATCAA CGGCAAAGAG
TTCAGCGCAA CCGCAAACTA TAAGTTCACC GTTCCTAGCT TTAACGCTGC AGGTGGTGAC
GGTTATCCAA AACTGGCTAG CCCAATCCAA ACGGGTTATG TGGATGCGGA CTTACTCTAT
TCATTCCTGA AAGAGAAACA AGCTATCGTT GCTGCAGACT ACAACCCAGT GGGCGACATT
GTTTACGAAA ACTCAAACAG TGTTGAAGGC TGTAAGCTGT AA
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| Protein sequence | MTNKLIKGLI ATAVLAALAG CNSDDDNTKV PTTCAEAGSA CKTFTVLHTN DNHGRFWENS
DGEYGMAARK ALVDQIRAEV SKNGGQTLLL SGGDINTGVP ESDLQDAIPD FTGMNKIGYD
AMAVGNHEFD NPLSVLDMQR RLAEFPMLAA NIYRKNAEGG QGERYFEPYK VFDINGLKVA
VIGLTTEDTA KIGNPEFISD LIFTDPKVEV AKVIKEIKDA KAADVIFATT HMGHYADGQN
GSNAPGDVAM ARALNKGDLQ VVIGGHSQNP VCMEPGTDNK SYADFKPGDD CAPDQQNGTW
IMQAHEWGKY VGRADFEYFN GELHLASYKL IPVNMRKLDE AGKKTTELAG TKIEPDAELK
ELLSYYQEKG QAKLDEVIAT TDALLDGERA NVRNKQTNLG RMLAMAQSGK VSADFGVMNS
GGVRASIQAG DITYRDVLTV QPFGNMVTLN EMTGTEVAAY LGAVGSIQIG SGGYAQITGV
KMTIDCVAKT ANISEINGKE FSATANYKFT VPSFNAAGGD GYPKLASPIQ TGYVDADLLY
SFLKEKQAIV AADYNPVGDI VYENSNSVEG CKL
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