Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2259 |
Symbol | |
ID | 4252830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2701156 |
End bp | 2701995 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118884 |
Product | hypothetical protein |
Protein accession | YP_734387 |
Protein GI | 113970594 |
COG category | [S] Function unknown |
COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000651935 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.545232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGA GTGGACTGGT TGGATTAGGC TTAAGGCGTG AAATGCTCAG TGAGTTTTGC CAAGCGCTGC CAACGGCTAT CGATTTTTTA GAGGTCGCCC CTGAAAACTG GATGACGCTC GGTGGAAAAT ACGGCAAGCA ATTTAGGCAG CTTACTGAGC AACATACTTT TTTCTGCCAT GGTCTATCAC TCTCTATCGG CAGTCCTGCC CCCTTAGATT TGGAATTTGT CCGCCAAGTG AAGGCGTTTA TGGATCTGCA CCAAATTGAA GTCTATTCGG AGCATTTAAG TTATTGCTCG GGTGGCGGTC ATTTATACGA TCTCATGCCC ATTCCCTTTA CCTATGACGC CGTTAAGCAT GTGGCAACGC GGGTAAAACA GGTGGAGGAT ATTTTAGAGC GGCCTTTGAT CCTCGAGAAT ATTTCCTTTT ATGCCGCGCC GAGCGCACAG ATGAGTGAGC AGGCATTTTT GACCGCAGTG TTAGAAGAGG CCGACTGTAA GCTGCTGTTA GATGTTAATA ATATCTATGT GAATTCGATA AATCATCAAT ACGATGCCGA GGCTTATTTA AAGGCCATGC CAACGGAGCG CATCGCCTAT TTGCATATCG CAGGGCATTA CCAACAGTCT GAAACCTTGC TGATCGACAC CCATGGCAGC GACATCAACG ATCCGGTTTG GGCATTGTTG GATAAGTGCT ATGCCCAGCA TGGTGTCTTG CCGACACTGC TGGAACGTGA CTTTAATCTG CCTGAAACGG TGCAGTTATT GGATGAGATT AATCAAATCC ATGCCTATCA AGCGCGGGCG AAAAATCGTT TAGACAAGAG GATTGCCTGA
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Protein sequence | MQESGLVGLG LRREMLSEFC QALPTAIDFL EVAPENWMTL GGKYGKQFRQ LTEQHTFFCH GLSLSIGSPA PLDLEFVRQV KAFMDLHQIE VYSEHLSYCS GGGHLYDLMP IPFTYDAVKH VATRVKQVED ILERPLILEN ISFYAAPSAQ MSEQAFLTAV LEEADCKLLL DVNNIYVNSI NHQYDAEAYL KAMPTERIAY LHIAGHYQQS ETLLIDTHGS DINDPVWALL DKCYAQHGVL PTLLERDFNL PETVQLLDEI NQIHAYQARA KNRLDKRIA
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