Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2251 |
Symbol | |
ID | 4252822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2692275 |
End bp | 2694188 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118876 |
Product | heat shock protein 90 |
Protein accession | YP_734379 |
Protein GI | 113970586 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000711928 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.266626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAC AAGAAACTCA TGGTTTTCAA ACTGAAGTCA AACAGCTGTT GCATTTGATG ATCCATTCTT TGTATTCCAA CAAAGAAATT TTCTTGCGTG AACTGGTCTC CAACGCTGCG GATGCGGCCG ATAAGCTGCG TTACCTTGCG TTGACCAACG ACGCACTATA CGAAGGTGAC GGTGAGCTAC GTGTGCGCAT CAGCGCAGAC AAAGAAAAAG GCACTGTGAC CATCGAAGAC AACGGCGTAG GTATGACCCG CGATGGTGTG ATTGAGCATT TAGGCACGAT CGCCAAGTCG GGCACTGCTG AATTCTTCAA AAACCTCTCA GGCGAGGCCT CAAAGGATTC GCAGTTGATC GGTCAATTCG GTGTGGGCTT CTATTCCGCC TTTATCGTGG CGAAAAAAGT TACAGTACGC ACCCGTGCGG CGGGCCATAA GGCCAATGAA GCCGTATTGT GGGAATCGGA AGGTGAGGGC AGTTTCACCG TCGATACCAT CACTAAGGCG AGCCGTGGTA CTGAGATCAC CCTGCACCTG CGTGATGAAG AGAAAGAGTT TGCCGATGAG TGGCGCCTAC GTTCCATCAT CACAAAATAC TCAGATCATA TCTCCGTACC CGTTGAAATG TGGCAGGAAG GCACCCCTGA GCGCGATGGC CCAGACGGTG AAAAAATCCC CGCTACCGAA GGTTACTGGA AGGTCATGAA CAAGGCGACT GCGCTGTGGA TGCGCAATAA GTCTGAGATC AGTGACGAAG AGTACCAAGA ATTTTATAAG CACATTTCCC ACGACTACAC AGACGCACTG CTGTGGAGCC ATAACCGCGT TGAAGGTAAA CAGGAATACA CTAACCTGTT GTATATCCCT TCAAAAGCGC CATGGGATCT GTGGAACCGC GACCGTAAGC ATGGCTTGAA ACTCTTTGTT CAGCGCGTGT TTATCATGGA TGACGCCGAG CAGTTTATGC CATCTTACCT GCGCTTTGTG CAGGGTTTGA TTGACTCAAA CGATCTGCCG CTGAACGTGT CTCGCGAGAT TTTGCAGGAC AACCACATCA CCAAGGCGAT GCGCACCGGT ATCACTAAGC GCGTGCTGGG TATGTTGGAA AAACTGGCAA AAGACGATGC GGAAAAATAC CAACAATTCT GGGCCGAATT TGGTCAAGTG TTGAAGGAAG GCCCAGCGGA AGACTTTGCA AACCGTGAGC GTATTGCAGG CTTACTGCGT TTTGCGTCTA CCCATACTGG CAGCGCGGCC CCAACAGTGT CACTCGATGA CTACTTAAGC CGCATGAAGG AAGGCCAAAC CAAGATTTAC TATATCGTTG CCGACAGCCA TGAAGCCGCG GCCAACAGCC CACACTTAGA ACTGCTGCGT AAGAAAGGCA TCGAAGTGTT GCTGATGTCA GAACGTATCG ACGAGTGGTT AATCAATCAC TTAACCGAAT ACAAAGAGAA ACAACTGCAC TCAGTGACCC GTGGCGAGCT GGAATTAGGT GAGCTGGAAG ATGCGGCCGA GAAGGAAGCG CAGGAGAAAC TCGCCGAAGA GTCTGCGCCA TTAGTTGAAC GCATTAAAGC GGCATTAGGC GCTAGCGTGG CCGATGTGAA AGTCACTTCA CGCTTAACCG ATACCCCAGC CTGTGTGGTG ACGGGTGAAG GTGAGATGTC GAGCCAGATG ATCAAACTGA TGCAAGCTGC GGGTCAGCCA GTGCCAGAGG TTAAGCCGAC GTTTGAGATC AACCCAGCGC ACCCATTAGT GTCGCGCTTA AACGATCTAC AAGATGAAGC CGCCTTCGCC GATTGGTCGA ATCTGTTATT GCAGCAGGCG CAATTGTCGG AGAAGGGCAG CCTAGCGGAT CCATCGGCCT TTATTAAGCT GATGAACCAA ATGCTATTGG CGAACCTGAA GTAA
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Protein sequence | MSQQETHGFQ TEVKQLLHLM IHSLYSNKEI FLRELVSNAA DAADKLRYLA LTNDALYEGD GELRVRISAD KEKGTVTIED NGVGMTRDGV IEHLGTIAKS GTAEFFKNLS GEASKDSQLI GQFGVGFYSA FIVAKKVTVR TRAAGHKANE AVLWESEGEG SFTVDTITKA SRGTEITLHL RDEEKEFADE WRLRSIITKY SDHISVPVEM WQEGTPERDG PDGEKIPATE GYWKVMNKAT ALWMRNKSEI SDEEYQEFYK HISHDYTDAL LWSHNRVEGK QEYTNLLYIP SKAPWDLWNR DRKHGLKLFV QRVFIMDDAE QFMPSYLRFV QGLIDSNDLP LNVSREILQD NHITKAMRTG ITKRVLGMLE KLAKDDAEKY QQFWAEFGQV LKEGPAEDFA NRERIAGLLR FASTHTGSAA PTVSLDDYLS RMKEGQTKIY YIVADSHEAA ANSPHLELLR KKGIEVLLMS ERIDEWLINH LTEYKEKQLH SVTRGELELG ELEDAAEKEA QEKLAEESAP LVERIKAALG ASVADVKVTS RLTDTPACVV TGEGEMSSQM IKLMQAAGQP VPEVKPTFEI NPAHPLVSRL NDLQDEAAFA DWSNLLLQQA QLSEKGSLAD PSAFIKLMNQ MLLANLK
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