Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2220 |
Symbol | |
ID | 4252793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2652023 |
End bp | 2653135 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118846 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_734350 |
Protein GI | 113970557 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.708176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.437411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGC TATTTTCTCC TTTCAAATTA AAAAATATTA CCCTTAAAAA CCGCATTGCC GTGGCACCTA TGTGCCAGTA TCAGGCTCAC GACGGGCTGA GTAACGACTG GCACCAAGTG CACTACACGA GCCTTGCTCG CGGCGGCGCA GGCTTAGTGG TGGTTGAGGC GACCGCCGTA TCGCCAGAGG GGCGGATCAC TCCGCGCTGT TTAGGCTTGT GGAACGATGA GCAAGCGGCG GGCTTAGCAA AAATTGCCAC GGCAATTAAA GATTCTGGCG CGGTGGCGGG GATCCAAATC GCCCACGCTG GTCGTAAAGC CAGTGCCAAC ATTCCTTGGG AAGGGGATGA CCATATTGAG GGGGATCAAG GTTGGCAAAC ACTGTCGCCA TCGGCCGTGG CATTTGGCGA AAACCTTGGC AAAGTACCGA CAGCCATGAC GATTGACGAT ATTCAACGTG TGAAAGCCGA TTTTGTGGCG GCGGCCAAGC GAGCGCTCGA CGCTGGGTTT GAATGGTTAG AGCTGCACTT TGCTCACGGC TATTTAGCGC AAAGCTTCTT CTCTACCTAT GCCAACCAAC GTACCGATGA ATACGGTGGC GATGCCGAAG GACGAGGCCG TTTCCTTATC GAGACAGTGG AAGCGGTGAG GGCGGTTTGG CCTGAGCATT TACCGTTAAC GGCGCGCTTT GGTGTGATTG AATTTGATGA TAAAGACGAG CAAACCCTGA GTGAGTCCAT CGCCTTGGTA AAGCAATTTA AGCGCGCGGG CCTCGATATG CTTAACGTCA GTATTTGTTT TTCAACCCCC ACGGCGAACA TTCCTTGGCG TCCAGCCTTT TTGGCGCCTA TTGCCGAGCG AGTGCGTCGG GAAGTAGGTT TCCCGGTGGC AACATCTTGG GGCATGGATA ATCCTCACCA TGCGGAGCAA GCGATTCAAG ATCAGCAAAT GGATTTAGTG ATGATAGGTA AAGCGTTCTT GGCTAACCCT CACTGGCCTT ATCAAGCGGC ACAAACCTTA AAGGTCTCGC GTCCATCTTG GGTATTACCT TCATCCTACG CCCATTGGTT AGAACGTTAC TCCACCGTGA AAGTGGAATC ATCCATAGAT TGA
|
Protein sequence | MTQLFSPFKL KNITLKNRIA VAPMCQYQAH DGLSNDWHQV HYTSLARGGA GLVVVEATAV SPEGRITPRC LGLWNDEQAA GLAKIATAIK DSGAVAGIQI AHAGRKASAN IPWEGDDHIE GDQGWQTLSP SAVAFGENLG KVPTAMTIDD IQRVKADFVA AAKRALDAGF EWLELHFAHG YLAQSFFSTY ANQRTDEYGG DAEGRGRFLI ETVEAVRAVW PEHLPLTARF GVIEFDDKDE QTLSESIALV KQFKRAGLDM LNVSICFSTP TANIPWRPAF LAPIAERVRR EVGFPVATSW GMDNPHHAEQ AIQDQQMDLV MIGKAFLANP HWPYQAAQTL KVSRPSWVLP SSYAHWLERY STVKVESSID
|
| |