| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2210 |
|---|
| Symbol | |
|---|
| ID | 4252783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2642753 |
|---|
| End bp | 2643268 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638118836 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734340 |
|---|
| Protein GI | 113970547 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.40768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTAC CCCTACTCAC TAAAACAATT ACTGTGGCCA TGACTGTCGC CGCACTGATT
TCACCCCAAG TGCTCGCCTC ATCGGGTATA GGTAAAGTCG ATTTAGTGGT GATCACTAAG
TCTGAGTCCA ATATGGCGCT GTTAAGGGAC GGCAAAATCC TCAAGCAATA CCGTATTGCC
ATGGGTGACT TGCCGACGGG CCACAAGTTA ACTGAAGGCG ACCAACGTAC GCCGCAGGGC
CGTTATATTC TGGACTATAA AAAATCCGAT AGCGCCTATT ACAAGTCGAT CCATATTTCT
TATCCAAATG AAGAAGATAA GTTAAGAGCC AAGGCACTGG GGATCCGCCC GGGCGGCATG
ATCATGATCC ACGGCCAGAA CCCTCGTTCA CCTCTCTCGC CCGAGCAGGC ACAGCAATAC
AACTGGACCG ACGGTTGTAT CGCCATTACC AACGCCGAGA TGGATGAAGT GTGGAAAGCC
GTCGATGAAG GCACGCCCAT CGAGATTTGG CCCTAA
|
|---|
| Protein sequence | MRVPLLTKTI TVAMTVAALI SPQVLASSGI GKVDLVVITK SESNMALLRD GKILKQYRIA
MGDLPTGHKL TEGDQRTPQG RYILDYKKSD SAYYKSIHIS YPNEEDKLRA KALGIRPGGM
IMIHGQNPRS PLSPEQAQQY NWTDGCIAIT NAEMDEVWKA VDEGTPIEIW P
|
|---|
| |