Gene Shewmr4_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2208 
Symbol 
ID4252781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2640090 
End bp2641646 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content51% 
IMG OID638118834 
ProductPpx/GppA phosphatase 
Protein accessionYP_734338 
Protein GI113970545 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.620115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTGCCA CACATTCACA ACCGCGACAC TTTGTCGCTA TCGACATGGG CTCGAACAGT 
TTTCATCTGG TTATCGCCCG TGAGCAAGAC GGCAGCTTGC AAATATTGCA CAAAGAAAAA
CAACAAGTTC AGTTAGCGAC GGGTCTCAAT GCGCAGAACA TCCTCAGCGT GGATGCTATC
GAGCGCGGCC TCAATTGCCT GCGGGACTTT AATCAGCGTT TTTCCAACCT CGACCAAGCC
CAAGTGCGTT TAGTCGCTAC CCACACCCTA AGGGTGGCCA AAAACCGTGA GCAGTTTATT
GAAGCGGCAC TCAGCATTAT GCCCTACCCG GTGGAGGTGA TTTCTGGCCA CGAGGAAGCG
CGCCTTATCT ATAACGGCAT TGCCCAAAGC CAAGTGCTTG GCAAACGGAA TATAGTGATC
GACATTGGTG GCGGCTCGAC CGAAGTGGTC CTCGGGCAAA AAAATACTCC CACCCATTTA
TCGAGCCTGC GTTGTGGCTG CGTGAGTTTT AACGAGCGTT TTTTTATCGA TGGCCAAATC
ACACCGGCCT CATTTCGCGG AGCCCAAAGC GCCGCCGATA AACAATTTGC CTCACTGTCG
AAGGAATATT TCAGTGGCGA CTGGGACTTA GTGCTTGGCA GCTCTGGTAC AGTCAAAGCC
ATTTGCGAAG CGATTCAGGA AGATCATGGC GATGAAATCG TCACCCTCGC CCGTCTCAAA
CAATTAAAGC TGAAACTGAT TAAGTGCGGA CACATCAGCC AAGTGCAATT TGCTAATGTC
GATGATAAAC GCACGCCGCT CGTACCCGCA GGCCTTGCCA TTTTAATCAG CTTTTTTAGG
CGCTTACCCA TTGAGCAATT GGAGTTTAGT CCGGGCGCCC TGCGCGAAGG CGTACTCTAC
GAATTAGCGA AAATCGGCCA ATATCAAGAT ATTCGCCACC GTACAGTTGA AAGCATCGCC
CAGCTTTACC ATGTGGATAT GCCCCATGCG GCCAAAGTGC GGGACACCGC CATGGCGCTG
TTTGAGCAGG TCGCCGATGA ATGGGGATTA AGGCCCCATG CACGTTTGCT CTCCTACGCC
GCCACCTTGC ATGAGATAGG GCTGCACATT AACTCAAAGG CATTGCATAA ACACGGCGCT
TATATCATTA GCAACAGCGA CTTACCCGGC TTTAGCGAGG CGCTGCAACA GGATTTAGCC
AGACTGATTG CCAACCACCG TAAGAAACCC AATGAATTAC TACTGGCCGA ATTAGAACCT
GGCCACAAAC TCACCCTCAT TCGTCTCGCC TGTCTGCTGC GCTTGGCGGT GTTAGTGCAT
TTAGGCCGAA TTGCCAAAGC CCTAGTGCTT GAAAAAATCC AAGTGGTTCC AGATGGGCTC
ATGCTAGTGC TACCCAGCCA TAAACGTAAA ATCAGTTTAT TTATGAAAGA TTTGCAGCGT
GAACAAAAAC AGATGGCGGC TTTAGGGATG CAGCTGCGTT TAGTCTCTAG CCTTGGGCTG
AATCAGGATA AAAATCTCGA GGTAAAAGAC GACACACTGA ACGCCGTCGC CAGCTAA
 
Protein sequence
MVATHSQPRH FVAIDMGSNS FHLVIAREQD GSLQILHKEK QQVQLATGLN AQNILSVDAI 
ERGLNCLRDF NQRFSNLDQA QVRLVATHTL RVAKNREQFI EAALSIMPYP VEVISGHEEA
RLIYNGIAQS QVLGKRNIVI DIGGGSTEVV LGQKNTPTHL SSLRCGCVSF NERFFIDGQI
TPASFRGAQS AADKQFASLS KEYFSGDWDL VLGSSGTVKA ICEAIQEDHG DEIVTLARLK
QLKLKLIKCG HISQVQFANV DDKRTPLVPA GLAILISFFR RLPIEQLEFS PGALREGVLY
ELAKIGQYQD IRHRTVESIA QLYHVDMPHA AKVRDTAMAL FEQVADEWGL RPHARLLSYA
ATLHEIGLHI NSKALHKHGA YIISNSDLPG FSEALQQDLA RLIANHRKKP NELLLAELEP
GHKLTLIRLA CLLRLAVLVH LGRIAKALVL EKIQVVPDGL MLVLPSHKRK ISLFMKDLQR
EQKQMAALGM QLRLVSSLGL NQDKNLEVKD DTLNAVAS