| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2131 |
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| Symbol | |
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| ID | 4252704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2545225 |
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| End bp | 2546439 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118755 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_734261 |
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| Protein GI | 113970468 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.547964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATT CTCCGCTTTC TGCCAGCTCG AATGAATTAG TGATCAGTAT CTTAGCTATG
GTGCTAAGCG AAGGAAAACC CTTAGACCGG GCGTATTCTC AGCATTTTTC GGGATTAAAG
TTAGTACCCG CCGAACAGGC GCGTATTGCC ACTGTAACGG GCGATATTCT GCGCCGGTTA
AATCTGTATT GTTTCTTAGC CGAAATTAAG CCTGAAGAAA TGGAGCGTTT AGGCTCTAAG
CTGCTTAATG TGTGGCATTT ATTCCACAAG CTAGAACTGC CTAAGATGCA GTATTCCTTG
CCGGTCGATG CAGAGCGTTT AGCCGAGCGT ATCGAGCAGG CGCAGCGCCA ACCCGTACTT
TGGGACGGTT GCCCTGAATG GCTAGATACC ATGGGTCAAG CGCAGCTTGG CACGTCTTGG
GAAAAGGAGC GCGCCGCCTT AAGCACGCCA CCAAAACGCT TCCTGCGGGT CAATGGCCTG
AAAGTCAGTC GTGATGAGTT AGCGCAAAAA CTGGCGACCG AATTTGTCAC CACCCAAGCG
GTTGAGGACG TTGATTCAGC CCTTGAAGTG ACCTCCGATT CCGCGCTGTT CCGGACTAAC
AGCTTTAAAG ACGGTCTATT TGAGCAACAA GATGCGGGCT CACAACGTGT GGCCGCCGCG
CTCGATGCCA AACCGGGAAT GCGAGTGATC GATGCCTGCG CGGGAGCGGG GGGCAAGACC
CTACATATCG CCGCGCAGAT GCAGGGTAAA GGCCGTTTAT TGGCGATGGA TGTGGAGCAA
TGGAAACTCG ACAACCTCAA GGAACGCGCC CGCCGTAATG GTGCCCACAA TATCGAAACC
CGATTAATTG TCGGCTCAAA AACCATCAAA CGCTTAAAAC TTAGCGCCGA TCGTGTGCTG
CTCGATGTGC CTTGCTCTGG CCTTGGGGTA TTAAAGCGCA ATCCCGATGC TAAATGGCGT
GATACCGCCG AGCGTTTACC CGTGTTGATG GAGCTGCAAA AGCATATCCT GAGCAGTTAT
AGCCGTATGG TGAAGGTTGG CGGCATTGTG GTGTACGCGA CCTGCTCAAT TTTCCCCTGT
GAAAACCGCG GCCAAGTGGA TGCTTTTTTA GCGGAAAACC CCAATTTCCG CTTGCTTGAG
GATGAAACTA TCAGTCCTGC CGATAGCGGA TTTGATGGTT TTTATTTAGC AAAACTCGAG
CGAATTCAAG AGTAA
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| Protein sequence | MLNSPLSASS NELVISILAM VLSEGKPLDR AYSQHFSGLK LVPAEQARIA TVTGDILRRL
NLYCFLAEIK PEEMERLGSK LLNVWHLFHK LELPKMQYSL PVDAERLAER IEQAQRQPVL
WDGCPEWLDT MGQAQLGTSW EKERAALSTP PKRFLRVNGL KVSRDELAQK LATEFVTTQA
VEDVDSALEV TSDSALFRTN SFKDGLFEQQ DAGSQRVAAA LDAKPGMRVI DACAGAGGKT
LHIAAQMQGK GRLLAMDVEQ WKLDNLKERA RRNGAHNIET RLIVGSKTIK RLKLSADRVL
LDVPCSGLGV LKRNPDAKWR DTAERLPVLM ELQKHILSSY SRMVKVGGIV VYATCSIFPC
ENRGQVDAFL AENPNFRLLE DETISPADSG FDGFYLAKLE RIQE
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