Gene Shewmr4_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2101 
Symbol 
ID4252674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2505611 
End bp2506039 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content49% 
IMG OID638118725 
ProductMarR family transcriptional regulator 
Protein accessionYP_734231 
Protein GI113970438 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.741541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAA ATACCCTAGG CGCACTCTTA AGTGATATTA CCCGCATGAT GCGCCGCGTA 
TTCCAAGAAA CCTACAGGCC CACGGCAGAC TGCTCGCTGA CACTGTCTCA GGCGAGAGCC
TTATTACATA TCGAGCGCAA CGAAGGTCTT AAACAGATTG AACTGGCGGA TCGCCTCGAA
ATTAAACCTA TCACGGCCGC GAGATTAATT GATGTGTTGT GTGACGCAGG TTTGGTTGAA
CGTAGGCCCG ATGCCAAGGA CAGACGCGCT TTTCAGTTAT TTTTGACTGA AGCGGCTGCG
CCCCATTTGG CCGAAATTGA ACGCGCCGTG ACCATAGTGT ACGCCCAAGC CTTTAAAGGA
TTCGATGAAG CCGAGTCACA GATGGTGGTC CGCTTGTTGT CGCAAATTCA TAAAAATTTT
TCAGTCTAA
 
Protein sequence
MASNTLGALL SDITRMMRRV FQETYRPTAD CSLTLSQARA LLHIERNEGL KQIELADRLE 
IKPITAARLI DVLCDAGLVE RRPDAKDRRA FQLFLTEAAA PHLAEIERAV TIVYAQAFKG
FDEAESQMVV RLLSQIHKNF SV