Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2089 |
Symbol | |
ID | 4252662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2490129 |
End bp | 2490749 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638118713 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_734219 |
Protein GI | 113970426 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.995215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAAAGC CGAATATTGA ATACCCTGTT ATTGAGCCGA ATCGCTATTT TGATCATCAT TTTGGCTGTG ATGCGGTTAA AATTCTGCCG GGGGAGTTTT ACGCCACACG GGACCAAACC ATGATAGTCA CAGTGTTAGG CTCATGTGTG TCCGTTTGCC TCTCCGATCC TGAATTAAAA ATTGGGGGGA TGAACCATTT TCTATTGCCG AGTGACAACG GCAATTGTTC GGGAATATTA GCAGATTCAG CTCGTTACGG TGTGTACGCC ATGGAGTTAT TGATCAACGA GCTGCTCAAA CTCGGTGCTA GGCGCCGTGC CTTGGTCGCT AAAGTGTTTG GTGGTGGAAA TATGCTTAAC GGGATCACCA CCCATAATAT CGGCGAGCGT AATTCGGAGT TTGTGCTCGA ATATTTGCAG CTTGAGCAAA TCCCGATACT GGCCGCAGAC TTACTCGATT ATTATCCTCG AAAGGTATAT TTTTTTCCGG CGACAGGTTT AGTAAAAGTT AGAAAAATCA GAACAATGCA TAATAGCACC ATTATGGACA GGGAAAGTGA GTATCGCCTA AGGATCAGGA ATTTGCCGAG CGGCGGTGAT GTGGAACTCT TTGGTGACTA A
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Protein sequence | MPKPNIEYPV IEPNRYFDHH FGCDAVKILP GEFYATRDQT MIVTVLGSCV SVCLSDPELK IGGMNHFLLP SDNGNCSGIL ADSARYGVYA MELLINELLK LGARRRALVA KVFGGGNMLN GITTHNIGER NSEFVLEYLQ LEQIPILAAD LLDYYPRKVY FFPATGLVKV RKIRTMHNST IMDRESEYRL RIRNLPSGGD VELFGD
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