Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2064 |
Symbol | |
ID | 4252637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2458162 |
End bp | 2458740 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118688 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_734194 |
Protein GI | 113970401 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000052503 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAT ATCTCCTGTT GTTGATCAGC ACAGTGCTGG TTAACAATTT CGTTTTAGTG AAATTCTTAG GTTTATGTCC ATTTATGGGG GTCTCCAGCA AGTTGGAGTC CGCTATCGGC ATGTCTATGG CCACGACCTT TGTGTTGACC TTAGCGTCAA TCCTCAGTTA CCTCGTCAAC CAATATCTGT TATTGCCCTT TGACTTAGGT TACCTGCGTA CCATGAGCTT TATTCTGGTG ATTGCCGTGG TGGTGCAATT TACTGAGATG GTGGTGCAAA AAACCAGTGC GGCTTTACAC CGCGCCCTCG GTATCTATCT GCCGCTCATC ACCACTAACT GCGCCGTACT CGGGGTTGCC CTGTTAAACG TGAACGAAAA ACACGATTTT ATTCAATCTG CTATCTATGG TTTTGGTGCA GCGGTGGGTT TTTCCTTAGT GTTAATTCTG TTTTCCGCGA TGCGTGAACG TTTAGCTGCG GCCGACGTGC CTATGCCTTT CAAAGGTGGC GCGATTGCCA TGATCACCGC AGGGCTGATG TCCTTGGCCT TTATGGGATT CACAGGATTG GTTAAATAG
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Protein sequence | MSEYLLLLIS TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVN QYLLLPFDLG YLRTMSFILV IAVVVQFTEM VVQKTSAALH RALGIYLPLI TTNCAVLGVA LLNVNEKHDF IQSAIYGFGA AVGFSLVLIL FSAMRERLAA ADVPMPFKGG AIAMITAGLM SLAFMGFTGL VK
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