| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2061 |
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| Symbol | |
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| ID | 4252634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2451855 |
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| End bp | 2453876 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118680 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_734191 |
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| Protein GI | 113970398 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000836148 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAAT CTGTTTTTCA GCTTGAATCT CAATTTGCTC CCGCAGGGGA TCAGCCCACG
GCCATTGCCA AGTTGGTCGA TGGCTTAGAA TCGGGCCTAG CTTGCCAAAC CCTATTGGGG
GTAACAGGCT CGGGCAAGAC ATTCACTATC GCCAATGTGA TCGCCCAACT GGGGCGCCCA
ACCATTATTA TGGCGCCAAA CAAGACGCTG GCGGCGCAGC TTTATGGCGA GATGAAAGAG
TTTTTCCCCA ATAATGCGGT GGAATACTTT GTCTCCTATT ACGATTATTA CCAGCCAGAA
GCCTATGTGC CCGCATCAAA CACCTTTATT GAAAAGGATG CGTCGGTTAA CGCCCATATC
GAGCAAATGC GACTCTCGGC GACTAAAGCC TTGTTGGAGC GTAAGGATGT CGTCTTGATT
GCCTCTGTAT CGGCAATTTA CGGTCTGGGC GATCCCGATT CCTACATGAA GATGCTTTTG
CACCTACGCC AGGGCGATAC CATGGGGCAG CGGGATATTC TTAAGCGCTT GAGTGAGCTG
CAATATACTC GTAACGATCT CGAGTTGCAG CGCGGTACTT TCCGCGCCCG TGGTGAAGTT
ATCGATATTT TCCCCGCCGA TTCTGACCGC TACGGGATTC GGGTAGAACT CTTTGACGAT
GAAATTGAGC GCCTAAGCGA ATTTGACCCG TTAACGGGGC AGATAGTTAA GCGTATCGCG
CGCACCACTG TGTATCCCAA AACCCACTAT GTGACGCCAC GGGAAAAAAT CCTTGAAGCG
ACTGAGTCAA TTAAGCAAGA GCTGCGCGAG CGTAAGCAGT ATCTGCTCGA CAACAATAAG
CTCATCGAAG CGCAGCGGAT CCATGAGCGG GTGCAATACG ATATCGAGAT GATGGTTGAG
TTGGGTTATT GCTCCGGCAT TGAGAACTAC TCCCGCTATT TGTCGGGACG GGCGCCGGGA
GAAGGGCCAC CAACCTTGCT GGATTATTTA CCCGCCGATG GTTTGTTGAT CATCGACGAG
TCCCACGTCA CTGTGCCGCA AATTGGTGCC ATGTATAAGG GTGACCGCTC CCGTAAGACC
ACGCTTGTGG AATATGGCTT CCGTTTACCC TCGGCGCTGG ATAACCGGCC ATTGAAGTTC
GAAGAGTTTG AGCAATTGAT GCCGCAGACC ATTTATGTGT CGGCAACGCC TAATCCTTAC
GAACTGGAGA AAAGCGACGG CGAGATTGTT GAGCAAGTCG TGCGGCCAAC GGGATTGCTC
GATCCCGAGT TAGAAGTGCG CCCGGTTAGC ATTCAAGTGG ATGATTTACT CTCCGAGGTC
GCTAAACGCG TCGCCGTCAA TGAGCGGGTG CTTGTTACCA CCTTAACCAA GCGCATGTCG
GAGGATTTAA CCGAATACCT CGATGAACAT GGCGTCAAAG TCCGTTATTT GCACTCGGAT
ATCGATACCG TGGAGCGGGT GGAGATCATT CGCGATCTGC GCCTTGGTAA GTTTGATGTG
CTGGTCGGTA TCAACTTGTT ACGCGAAGGC TTAGATATGC CGGAAGTCTC CTTGGTCTGT
ATTCTCGATG CGGATAAGGA AGGCTTTTTA CGTTCGGAGC GTTCACTGAT TCAGACCATT
GGTCGCGCCG CTCGTAACGT CAATGGCAAG GTTATCCTCT ATGCGGATAG GATCACTCAG
TCGATGGCCA AGGCGATGGG AGAAACTGAG CGCCGCCGTG AGAAACAGCG CGCCTACAAT
CTTGAGCACG GCATTGTGCC TAAAGGGGTG GTGAAACGCA TTACCGACGT AATGGATGTC
GATGATGGTA GAGAGTCTGA AAAAGGTTAT CGTCAGTCAT CACTGAATAA AGTGGCTGAA
CCTAAAGCCA AACGTTATCA AGCCGATGCG GCGCAGCTGA GCCATGATAT CGACAAGCTC
GAGAAGCAAA TGCATGAACA TGCGCGTAAC TTGGAGTTTG AACAGGCAGC GGCGCTACGC
GATGAGGTGA AACGGTTACG GGAGTTGCTG ATCACCGCTT AA
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| Protein sequence | MSESVFQLES QFAPAGDQPT AIAKLVDGLE SGLACQTLLG VTGSGKTFTI ANVIAQLGRP
TIIMAPNKTL AAQLYGEMKE FFPNNAVEYF VSYYDYYQPE AYVPASNTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYMKMLL HLRQGDTMGQ RDILKRLSEL
QYTRNDLELQ RGTFRARGEV IDIFPADSDR YGIRVELFDD EIERLSEFDP LTGQIVKRIA
RTTVYPKTHY VTPREKILEA TESIKQELRE RKQYLLDNNK LIEAQRIHER VQYDIEMMVE
LGYCSGIENY SRYLSGRAPG EGPPTLLDYL PADGLLIIDE SHVTVPQIGA MYKGDRSRKT
TLVEYGFRLP SALDNRPLKF EEFEQLMPQT IYVSATPNPY ELEKSDGEIV EQVVRPTGLL
DPELEVRPVS IQVDDLLSEV AKRVAVNERV LVTTLTKRMS EDLTEYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGKFDV LVGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNVNGK VILYADRITQ SMAKAMGETE RRREKQRAYN LEHGIVPKGV VKRITDVMDV
DDGRESEKGY RQSSLNKVAE PKAKRYQADA AQLSHDIDKL EKQMHEHARN LEFEQAAALR
DEVKRLRELL ITA
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