| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2050 |
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| Symbol | |
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| ID | 4252623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2440623 |
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| End bp | 2441261 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118666 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_734180 |
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| Protein GI | 113970387 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00274298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.196014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTC GATCCGATAC AAAAACTAGA ATACTTGATG CCGCAGAGAA GCTTTTTGCC
GAAAGGGGGT TTTCTGAGAC GTCATTGCGA CTTATTACCA GCAAGGCGGA GGTTAACTTA
GCCTCGGTGA ACTATCACTT TGGCTCTAAA AAAGAGTTAA TTCGCGCCGT GTTAGCCCGC
TATTTAGACG TGTTTATGCC CGCCGCATCG ACGGCCATAA AACGCTTGCA TACAGCGCCA
ACACAAGCTT CGTTAGAGGA GATTTTCTCT GCGTTAGTCG ATCCATTATT GGATTTGAAC
GAGCTGCGCA CCGAAGGCAC GACAATTTTC CTACAATTGC TGGGTCGCGG TTACATTGAA
AGCCAAGGGC ACCTGCGTTG GTTTATCACC ACCCATTATG GGCAGCATTT AGACACCTTT
GTAAAAGCTG TTTCGGCCAG TGCACCGCAT ATTCCTCCTG CTGAAATGTT TTGGCGCTTA
CACTTTACCC TAGGCACGAT TGTTTTCACC ATGGCGTCAG CCGATGCGCT CAATGATATT
GCCGCGGCCG AATTTGGTGA GCATAACGAC ATCGAAGCCG TGATCCGTAA AGTGATCCCC
TACATGGCAG CGGGCGTATC TGTCCCCGTG GCTTCTTAA
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| Protein sequence | MASRSDTKTR ILDAAEKLFA ERGFSETSLR LITSKAEVNL ASVNYHFGSK KELIRAVLAR
YLDVFMPAAS TAIKRLHTAP TQASLEEIFS ALVDPLLDLN ELRTEGTTIF LQLLGRGYIE
SQGHLRWFIT THYGQHLDTF VKAVSASAPH IPPAEMFWRL HFTLGTIVFT MASADALNDI
AAAEFGEHND IEAVIRKVIP YMAAGVSVPV AS
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