Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2045 |
Symbol | |
ID | 4252618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2433217 |
End bp | 2433915 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118661 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_734175 |
Protein GI | 113970382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.209244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAAAG AAACCGTATT TAAATCCTTT GATACACCTG CAGCGCTCGA GCAACAGTTG GCGAATAAGA TCGCCAGCCA GTTGCAAGAG GCTGTGGATG CGCGTGGTAA GGCTAGCTTA GTCGTTTCCG GCGGCTCAAC ACCGCTGAAA CTGTTTGAGC TCCTCAGCAT GAAATCCATC GATTGGAGTG ATGTTTATGT CACGCTCGCC GATGAGCGCT GGGTAGATGT GGAAGACAGT GCATCGAATG AGCGTTTAGT GCGTGAACAT TTACTGCAAA ACCGCGCGGC CAATGCCAAG TTCCGCGGAT TAAAGAATAT GTTTTCCACC GCCGAAGCGG GCGCCGATAT GACCGCCGAG TCGCTGTCTA ATTTTCCGCG TCCCTTCGAT GTAGTGGTGC TCGGTATGGG CAACGATGGT CACACTTGCT CATGGTTCCC TTGCAGCGCC GAGTTAAATG ATGCCTTGAG CACTCAGGCC CTGTGTGTGG CAACCAATCC CACCACAGCG CCCCACGGCC GGATCACATT ATCTAAGAAT GCGATCCTCA ATAGCAGACA GATTTATCTG CATTTGGTCG GGGAACAGAA ATTATCCGTA TATCGTCAAG CCTTAGAAAA TGATGATGTT AATGCTATGC CCATCAGAGC CGTATTAGCG CAGCGTAAAA CGCCCGTTGA CGTGTTCTGG AGCGCTTAA
|
Protein sequence | MIKETVFKSF DTPAALEQQL ANKIASQLQE AVDARGKASL VVSGGSTPLK LFELLSMKSI DWSDVYVTLA DERWVDVEDS ASNERLVREH LLQNRAANAK FRGLKNMFST AEAGADMTAE SLSNFPRPFD VVVLGMGNDG HTCSWFPCSA ELNDALSTQA LCVATNPTTA PHGRITLSKN AILNSRQIYL HLVGEQKLSV YRQALENDDV NAMPIRAVLA QRKTPVDVFW SA
|
| |