| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2028 |
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| Symbol | |
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| ID | 4252601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2415117 |
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| End bp | 2416295 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118644 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_734158 |
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| Protein GI | 113970365 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0377563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000145651 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAG CAACACTCAA CACTGATACA GTGCACCGTG TCGGCTTCTT GGATAAGGCA
TCGCTTCACA TTCCTATCCT TCGAATTCTA CAAGCAGACG GCACTACCTA TGAAACCGCG
GTTTTGCCTG TAATAGATGA AGCCTTAGCC ACCAAAATTT ACGATACCTG CGTGTTTACG
CGGGTACTCG ACGAACGTAT GTTAGGCGCG CAGCGTCAGG GCCGGATCAG CTTCTATATG
ACCTGTACAG GTGAAGAAGC GGCGATCGTC GGCAGTGTCG CGGCGCTGGA CGCTGAGGAC
GTGATCCTCG CGCAATATCG TGAACATGCG GCGCTACGTT ACCGTGGCTT TACCACTGAA
CAGTTTATGA ACCAAATGTT CAGTAATGAG AAGGACTTAG GTAAAGGTCG CCAAATGCCA
ATTCATTACG GCTGCGCTGC GTTAAACTAC CAAACCATCT CATCGCCACT GGCCACGCAA
ATCCCGCAAG CGACAGGTGT CGGTTATAGC CTGAAAATGC AAGGCAAACG TAATGTTGCC
GTCTGTTATT TTGGTGAAGG CGCTGCGTCT GAAGGTGACT TCCACGCCGG CTTGAATATG
GCTGCGGTGT TAAAATGCCC GGTGATTTTC TTCTGCCGTA ACAATGGTTA TGCGATTTCC
ACCCCAACCG AAGAACAGTT TGCTGGTAAC GGTATCGCTA GCCGCGGTGT GGGTTACGGC
ATGCACACCA TTCGTGTCGA CGGTAACGAT ATGCTGGCGG TGTTAGCCGC GACGCAACAG
GCGCGTGCCT ATGCGATTGA GCACAATGCC CCCGTGTTGA TTGAAGCCAT GACTTATCGC
CTTGGCGCGC ACTCATCTTC TGACGATCCT TCTGGCTATC GCTCCAAAGA AGAAGAGGCA
AAATGGCAGC AACACGATCC AGTCAAACGC TTCAAGTTAT GGTTGATCAA CAAAGGGTGG
TTGGCCGAGG CCGATGATGC CCTGCGTTAC GAAAAGTACC GTGAAGAAGT GTTAGCCGCC
GTTAAAGTCG CTGAAAAATT ACCTATCCCT ATGCTGGATG AGATCATTGA AGATGTGTTC
GACAAGCCAA CACCAGCGCT GAAAAAGCAG CTGAGTGAAC TTAAAGAACA CATCAAGAAA
TATCCGCAAT CCTATCCCAA AAGTGCAGGG AGGCTATAA
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| Protein sequence | MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDEALA TKIYDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDAED VILAQYREHA ALRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGCAALNY QTISSPLATQ IPQATGVGYS LKMQGKRNVA
VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKEEEA
KWQQHDPVKR FKLWLINKGW LAEADDALRY EKYREEVLAA VKVAEKLPIP MLDEIIEDVF
DKPTPALKKQ LSELKEHIKK YPQSYPKSAG RL
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