| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2020 |
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| Symbol | |
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| ID | 4252593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2404520 |
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| End bp | 2405713 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118633 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_734150 |
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| Protein GI | 113970357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00317803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000201349 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTTCT CTCAGGTAGT ACTCGCACCC GCTGATCCCA TCCTTGGTTT AACCGATACC
TTCAAGGCCG ATCCACGCCA AGATAAAGTG AACCTCGGTG TTGGCATTTA TAAGGATGAA
GCAGGGCAGA CTCCAGTATT ACAGTCAGTG AAGAAAGCAG AAGCCCTATT GCTTGAGCAA
GAGAAGACCA AGAACTATTT AGGTATTGAA GGGGTTCAAA CCTATAACCG CGTGGTACAA
GAGCTATTAT TTGGCGAGGG CAGTACGCTT GTGACGTCAG GCCGTGCCGC GACCGCTCAG
GCGCCAGGTG GTACTGGTGC ACTGCGTATT GCCGCCGAGT TTCTACTGCG CAACACGCCA
TCGCGCACTG TGTGGGTCAG TAACCCAACT TGGGCGAACC ATCAGAATAT TTTTGAAACT
GCAGGTTTAA CGGTTAAAGA ATACGGTTAC TACAATGCAA GTGCTCACGA TATCGATTTC
GATGGCATGA TGACTGATCT CGCCAATGCA CAGGCGGGTG ACATTGTTCT ACTGCACGGC
TGCTGCCATA ACCCAACGGG TATTGATTTG ACCTTAGCCC AATGGGAATT GGTTGCTAAC
CTGTGTGCAG ACAAACAGTT AGTGCCATTG TTTGACTTTG CTTACCAAGG TTTTGGTGCT
GGGATTGAAG AAGATGCCGC AGGTTTACGT TTAGTGGCTG CAAAAGTACC TGAGTTGTTA
GTGGCTAACT CATTCTCTAA AAACTTTGGT CTTTATAACG AGCGTATCGG TGCTGTGACT
GTGGTTGCAC AAAATGCCGA TGAAGCAGTA CGTGCCTTTA GCCAAGTGAA ACGTACTATC
CGCGCTAATT ACTCAAACCC ACCAGCACAC GGTGCGTTAA TCGTTAGCAC CATTTTAAGT
GATGCGGCAT TGAAAGCACT TTGGGTACAA GAGTTGACCG AAATGCGTGA GCGTATCGCC
GAGATGCGTA CCCTGTTCGT CCAAAGCTTA AAGGATGAAG GCGTCACCCA GGACTTTAGC
TTTATTTCCC GTCAAAACGG TATGTTTAGC TTCTCTGGTT TAAACAAAGC GCAGGTTGCA
CGCTTGAAAG ACGAGTTTGG TATTTATATC GTAGGCTCAG GCCGTATTAG TGTTGCCGGT
ATGACCAAAA CCAATATGCC TGTGATCTGT AAAGCGATTG CCCAGGTTCT TTAA
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| Protein sequence | MIFSQVVLAP ADPILGLTDT FKADPRQDKV NLGVGIYKDE AGQTPVLQSV KKAEALLLEQ
EKTKNYLGIE GVQTYNRVVQ ELLFGEGSTL VTSGRAATAQ APGGTGALRI AAEFLLRNTP
SRTVWVSNPT WANHQNIFET AGLTVKEYGY YNASAHDIDF DGMMTDLANA QAGDIVLLHG
CCHNPTGIDL TLAQWELVAN LCADKQLVPL FDFAYQGFGA GIEEDAAGLR LVAAKVPELL
VANSFSKNFG LYNERIGAVT VVAQNADEAV RAFSQVKRTI RANYSNPPAH GALIVSTILS
DAALKALWVQ ELTEMRERIA EMRTLFVQSL KDEGVTQDFS FISRQNGMFS FSGLNKAQVA
RLKDEFGIYI VGSGRISVAG MTKTNMPVIC KAIAQVL
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