| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2009 |
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| Symbol | |
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| ID | 4252582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2393809 |
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| End bp | 2394777 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118622 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_734139 |
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| Protein GI | 113970346 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0902386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000272898 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGCT TCTGGAGTAT TTGGATTAGC GTACTCTCGT TAATTGTGAT CGCAGGATGT
TTTCTGTTGC TGCGTGTGTG TTCAAAGAAC ACCACGGATG TCAAAGAAGG CGAATCTATG
GGTCACAGTT TCGATGGTAT CGAAGAACTC AATAACCCAC TGCCAAAATG GTGGAGTTAT
ATGTTCTATA TCACTATCGT GTTTGGCCTG GTTTACTTAG CCCTCTTCCC AGGTTTAGGT
AACTACAAAG GTCTACTGAA CTGGACCAGC TCTAACCAGA GCATTGGTAC AGAGAAAGGT
ATTAAAGCCG ATTCTGCAGC AGCGGTTGAG CTGGCTGCAA AAGAAGGCAT GTACGTTCAG
TATGATCAAG AAGTTAAACA TGCTAACGAA AAATATGGCC CAATCTTCGC GGCTTACTTG
GCTACACCAC TCGAAGAGTT AGTGAAAAAC CAAGAAGCGT TGAAAGTGGG CGGCCGTTTG
TTCCTACAAA ACTGCGCTCA GTGCCATGGC TCTGACGCAC GTGGTAGCAA AGGCTTCCCT
AACCTGACCG ACAGTGATTG GTTATATGGT GGTGATTTAG CCACTATCAA GACCACTATC
ATGAACGGTC GTCATGGCAT GATGCCACCA AAAGGTGGTT TGCCAATCGA CGATAGCGAA
ATTGCAGGTC TAGCCGAGTA CGTAGTTAAG TTATCTGGCC GTGAGCACGA CGAGAAACTC
GCCGCTCAAG GTCAAGGTTC ATTCATGAAG GGTTGTTTTG CGTGTCACGG TATGGACGCA
AAAGGCAACA AACTCATGGG CGCACCTAAC TTAACTGACG ATGTTTGGTT ATATGGCGGT
AGCCGCGGCA TGATCGAAGA AACGATCAAG CACGGCCGCG CAGGCGTAAT GCCAGCATGG
AAAGACGTTC TCGGTGAAGA GAAAGTCCAC GTGATCGCAG CTTATGTTTA TAGCTTGTCA
AACAAGTAA
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| Protein sequence | MSSFWSIWIS VLSLIVIAGC FLLLRVCSKN TTDVKEGESM GHSFDGIEEL NNPLPKWWSY
MFYITIVFGL VYLALFPGLG NYKGLLNWTS SNQSIGTEKG IKADSAAAVE LAAKEGMYVQ
YDQEVKHANE KYGPIFAAYL ATPLEELVKN QEALKVGGRL FLQNCAQCHG SDARGSKGFP
NLTDSDWLYG GDLATIKTTI MNGRHGMMPP KGGLPIDDSE IAGLAEYVVK LSGREHDEKL
AAQGQGSFMK GCFACHGMDA KGNKLMGAPN LTDDVWLYGG SRGMIEETIK HGRAGVMPAW
KDVLGEEKVH VIAAYVYSLS NK
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