Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1981 |
Symbol | |
ID | 4252554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2356070 |
End bp | 2356786 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118594 |
Product | GntR family transcriptional regulator |
Protein accession | YP_734111 |
Protein GI | 113970318 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000358345 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.05165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAATC AGGCAAATAA CCGTCCGCAG AATATCCATA ACTGGGTGGC AAGCGAATTA GGTTCTCGCA TTGTGGGCGG CTTTTATGCG CCAGGTGAAT ATATCCCTAA TGAAAATGCT ATCTGTGAAG AGCTGGAAGT GTCACGCACC TCGTTGAGGG AAGCCTTTAA GGTGCTCACG GCAAAAGGGC TTATCGAATC TCGTCCTAAA CTTGGCACCC GTATTCGTGA GCGTCGCCAC TGGAATATGT TCGATCCGGT GATCTTAAAC TGGTTTTCCC AATCTAAACC TTCGCCCGAG TTTTACACTT CTCTCTATGA AATCCGTGAA GTGTTTGAAC CCGCAGCGGC TGAACTGGCG GCGAAAAAAC GCACCCCTGA GCAGCTTGAG GTGATTGCGG CGGCCTATGC CAAGATGGAA GCGGCCGAAT TAGGTACGGA TGAAGTCTAT ACCTCGGACA TCGATTTCCA CATGGCGATT TTAGATGCGA CCAATAACGA GTTTATGGTG TCCCTCGGCG TGTCAATCCA ATCTGCGCTG CTCGAAATCT TTAGACTCAG TAGCACAATT CAGGATGACT TTATCCAATC ACTCCCAGGC CATAAGGCCA TTTATACTGC GATTGCCGCA GGGGACAGTG AAGGCGCGAA AGCCGAGATG AATAAATTAC TCTCGACCTC TCAAGATACA GTGCATAAAA ATATTGAGCG TAAATAA
|
Protein sequence | MANQANNRPQ NIHNWVASEL GSRIVGGFYA PGEYIPNENA ICEELEVSRT SLREAFKVLT AKGLIESRPK LGTRIRERRH WNMFDPVILN WFSQSKPSPE FYTSLYEIRE VFEPAAAELA AKKRTPEQLE VIAAAYAKME AAELGTDEVY TSDIDFHMAI LDATNNEFMV SLGVSIQSAL LEIFRLSSTI QDDFIQSLPG HKAIYTAIAA GDSEGAKAEM NKLLSTSQDT VHKNIERK
|
| |