Gene Shewmr4_1956 details

Gene Information

• Locus tag: Shewmr4_1956
• Symbol: infC
• ID: 4252529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 2333800
• End bp: 2334231
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638118568
• Product: translation initiation factor IF-3
• Protein accession: YP_734086
• Protein GI: 113970293
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000318119
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.362112
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGTAAGCA TCAGAGATGC TCAGAATTTG GCAGATGAAG CGGGTGTAGA CCTAGTCGAA 
ATTAGTCCAA ACGCTGAACC TCCAGTATGT CGCATTATGG ACTACGGTAA GTTCCTATTT 
GATAAAGCGA AAGCTCAAAA GGAACAAAAG AAGAAGCAAA AACAGGTTCA GGTTAAGGAA 
ATCAAATTCC GTCCTGGAAC TGACGAAAAC GACTATCAGG TAAAACTACG CAACCTGATA 
CGTTTTCTGG AAGACGGGGA CAAAGCGAAA ATTACGCTGC GTTTCCGAGG TCGCGAAATG 
GCTCACCAAA ACCTGGGTAT GGATCTATTG AACCGTATCA AAACAGACTT GGATGAGTAT 
GCAATTGTTG AATCCTTCCC GAAAATGGAA GGCCGACAAG CCATTATGGT GCTAGCGCCT 
AAAAAGAAAT AA 

 

Protein sequence

MVSIRDAQNL ADEAGVDLVE ISPNAEPPVC RIMDYGKFLF DKAKAQKEQK KKQKQVQVKE 
IKFRPGTDEN DYQVKLRNLI RFLEDGDKAK ITLRFRGREM AHQNLGMDLL NRIKTDLDEY 
AIVESFPKME GRQAIMVLAP KKK