| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1946 |
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| Symbol | |
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| ID | 4252520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2321936 |
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| End bp | 2323912 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118557 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_734077 |
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| Protein GI | 113970284 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.937169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.260337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATT CAATAACGCC GTCAGCGAAC GCTGTGGATT ATGCTTCTTT ATTACAGCAA
CAGTTTGGTT TTGATGGGTT CAGGCAAGGG CAACATGAGG TTGTCTCGCA GTTGTTGTCG
GGCCATTCGA GCCTTGCTAT TTTCCCCACC GGCTCAGGAA AATCACTCTG TTACCAATTT
ACCGCTCTGC AACTTCCGCA TCTAACCTTA GTGGTATCAC CCTTACTGGC GTTGATCAAA
GATCAACTGA GTTTTCTGCA TGAAAAAGGT ATCAAGGCGG CAAGTATCGA CTCGACCTTA
ACGCCTGAAT TAACCCAACA GGTCATGCGT GATGCTCGCT CTGGCGAATT AAAACTCTTG
ATGGTATCGG TTGAACGTTT TAAAAATGAG CGCTTTAGGC AATTTATTCA ATCAATTCCT
ATCTCTATGC TGGTTGTCGA TGAAGCGCAC TGCATCTCGG AATGGGGGCA TAATTTTCGC
CCCGACTATT TAAAGCTTCC CGATTATCGC CGTGAATTAG CAATTCCATT GGTGCTGTTA
CTCACGGCGA CCGCGACACG TAAAGTGAAA CTGGATATGG CGGCGCGTTT CGATATCAAG
CCACAACATA TTGTTCAAAC AGGCTTTTAT CGTTCAAACC TCGACTTGAC GGTCTTGCCT
GTAGCAAGCC AACACAAACT GACGGCACTG CAACAACAGC TTAATCACTT TACTGGTGCG
GGGATTGTGT ATGTGACTTT GCAGCATACT GCGGAGGATG TTGCCGCGAA ACTTTGCCAA
ATGGGCTTTG ATGCGAGTGC CTATCATGCG GGGTTTGAGG ATGAAAAACG TCAGCAAATT
CAGCAGGATT TTATGCAAGG TAAGATCCGC ATCGTGGTTG CGACTATCGC CTTTGGTATG
GGCATAGACA AAAGCAATAT TCGCTTTGTG GTTCACTACG ATCTGCCTAA ATCCATAGAG
AATTATTGCC AAGAAATTGG CCGTGCAGGA AGGGATGGTC AGCTCTCCCA TTGTGTGACT
TTGGCGAATT TAGATGGCAT AAACACGGTC GAAAATTTTG TTTACGGCGA TACGCCGGAA
CTGGCCAGTA TTACTGCCGT GATTGATAAC ATTCGCGAAG AAACCCATAA CGGACGTTGG
GAGCTGCAAC TTCATCAGCT ATCAAATGTG AGTAATATCA GGCAGCTCCC CCTTAAAACC
TTGCTAGTTC AGCTTGAAAT GATGGGCGTG ATTAAGCCGC TATATGCTTA TTACGCCGAT
ATCAGTTACC GTTTTATTGA GCCACAGGCG CAGATCTTGA GCCAGTTTTC CCCCGAGCGT
CAGGCATTTT TAAATGACAT CTTTACCCAT ACTCAGATGA AGCGAGTATG GGGCAGTTTA
GATTTTTCCG CGCTCTACCA AGCCACAGGT GCGGAACGTA CTCGAGTATT AGCGGCATTA
GAATATCTTG CCAGTCAGCA GCTTATCGAA TTGGAAGCTA AGCGAGTAAC GGATGTTTAT
CAAGTGAATA CTGAGGTGCT AGCACAGGGG CATTTAGCCG ACGGGCTCCA TCAATACTTT
ACCGACAAAG AGGCGAAAGA AGTCGCCCGT ATTGCCCAGT TAGTGCGATT TTTTGAGCTA
ACGACTTGCT TAAATTACAA TTTGGCCCGC TATTTTGATG ATAATGCCGC GCCTCAATCC
TGTGGTCATT GCAGTGTATG CCGTGGCCAA TTGGCTAAAT TGACGTATTC CGACGTGCCA
AAGTGGCCTG ATGATGCGCA GCTTAAGGCC GATTTGCATG AGCTGGAGCG CGCGGCGGAG
TCGAAAGGTC TAGCTTCATT ATCCTTAGAT ACTCAATGCC GGTTTTTGGC TGGCATGACA
TTACCGCTGT TTACTCGCCT ACAAGTACGG AAATTATCGG GTTTTGGTCG CTGCGAACAC
CTCAGATATG CAGAAATTAA AGCTAAATTA GCGCAGTTAG CCGACGCACC TTGCTGA
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| Protein sequence | MTYSITPSAN AVDYASLLQQ QFGFDGFRQG QHEVVSQLLS GHSSLAIFPT GSGKSLCYQF
TALQLPHLTL VVSPLLALIK DQLSFLHEKG IKAASIDSTL TPELTQQVMR DARSGELKLL
MVSVERFKNE RFRQFIQSIP ISMLVVDEAH CISEWGHNFR PDYLKLPDYR RELAIPLVLL
LTATATRKVK LDMAARFDIK PQHIVQTGFY RSNLDLTVLP VASQHKLTAL QQQLNHFTGA
GIVYVTLQHT AEDVAAKLCQ MGFDASAYHA GFEDEKRQQI QQDFMQGKIR IVVATIAFGM
GIDKSNIRFV VHYDLPKSIE NYCQEIGRAG RDGQLSHCVT LANLDGINTV ENFVYGDTPE
LASITAVIDN IREETHNGRW ELQLHQLSNV SNIRQLPLKT LLVQLEMMGV IKPLYAYYAD
ISYRFIEPQA QILSQFSPER QAFLNDIFTH TQMKRVWGSL DFSALYQATG AERTRVLAAL
EYLASQQLIE LEAKRVTDVY QVNTEVLAQG HLADGLHQYF TDKEAKEVAR IAQLVRFFEL
TTCLNYNLAR YFDDNAAPQS CGHCSVCRGQ LAKLTYSDVP KWPDDAQLKA DLHELERAAE
SKGLASLSLD TQCRFLAGMT LPLFTRLQVR KLSGFGRCEH LRYAEIKAKL AQLADAPC
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