Gene Shewmr4_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1938 
Symbol 
ID4252512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2309886 
End bp2310650 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content50% 
IMG OID638118549 
ProductDTW domain-containing protein 
Protein accessionYP_734069 
Protein GI113970276 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0458969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000543761 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCTAG CCCCCCACGC TGTACATCGT TTATATGAAT ACCGTAAATC CCTTTCAACT 
AAGCCCTTTG GCGCCCGCGG AAAAAAACTC ATCCGCTGTC ACTTGTGTCT ATTGGGTGAG
CAATTTTGTA CCTGTTCGCT GCGTAAACAG TTGACTACTC AGGCAAGTTT TATACTTATC
ATGTATAACG ATGAGGTATT AAAACCCACC AATAGTGGCC GCTTGATTGC CGATCTTATT
CCCGATACTC ATGCCTTTCT CTGGTCGCGC ACCGAACCCG CCCCTGAGCT GCTGGCACTA
TTGGCCTCAA GCGACTATCA ACCGTTTTTA GTCTTTCCCG CGCAATATGC CGACCAAGGG
CAAACCGTAT TGACTGAAGT TCCTATGGCG AGTCTTGCCG AGGGTAAACG ACCTTTGCTG
ATTATGCTCG ACGGCAGTTG GCGTGAGGCA ATTAAGATGT TTCGCAAGAG TACCTATCTG
CAAGGCTTAC CTATGTTGTC CTTCGATCCC GACACCTTAG CAACCTACGC CCTGCGTAAG
GGCAGCCATG ACTTTCAATT AGGCACGGCG GAAGTGGCGT CATTGGCATT GGCGGCTATG
GGCGAAGAGG CCAATGCCAA GGCATTAACG GCATGGTTCG ATCTCTTTGT TGAGTCATCA
TTGCTAGGAC GTAACCGCCG CTGCCGTGAA GACATTTTAC CCATCAGCGA TTTTACCGAC
GCCTTTGAAG CGGCTTACCA TGCTGCAACG CCTACCAGCA ATTAA
 
Protein sequence
MALAPHAVHR LYEYRKSLST KPFGARGKKL IRCHLCLLGE QFCTCSLRKQ LTTQASFILI 
MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TEPAPELLAL LASSDYQPFL VFPAQYADQG
QTVLTEVPMA SLAEGKRPLL IMLDGSWREA IKMFRKSTYL QGLPMLSFDP DTLATYALRK
GSHDFQLGTA EVASLALAAM GEEANAKALT AWFDLFVESS LLGRNRRCRE DILPISDFTD
AFEAAYHAAT PTSN