Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1938 |
Symbol | |
ID | 4252512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2309886 |
End bp | 2310650 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118549 |
Product | DTW domain-containing protein |
Protein accession | YP_734069 |
Protein GI | 113970276 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0458969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000543761 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTCTAG CCCCCCACGC TGTACATCGT TTATATGAAT ACCGTAAATC CCTTTCAACT AAGCCCTTTG GCGCCCGCGG AAAAAAACTC ATCCGCTGTC ACTTGTGTCT ATTGGGTGAG CAATTTTGTA CCTGTTCGCT GCGTAAACAG TTGACTACTC AGGCAAGTTT TATACTTATC ATGTATAACG ATGAGGTATT AAAACCCACC AATAGTGGCC GCTTGATTGC CGATCTTATT CCCGATACTC ATGCCTTTCT CTGGTCGCGC ACCGAACCCG CCCCTGAGCT GCTGGCACTA TTGGCCTCAA GCGACTATCA ACCGTTTTTA GTCTTTCCCG CGCAATATGC CGACCAAGGG CAAACCGTAT TGACTGAAGT TCCTATGGCG AGTCTTGCCG AGGGTAAACG ACCTTTGCTG ATTATGCTCG ACGGCAGTTG GCGTGAGGCA ATTAAGATGT TTCGCAAGAG TACCTATCTG CAAGGCTTAC CTATGTTGTC CTTCGATCCC GACACCTTAG CAACCTACGC CCTGCGTAAG GGCAGCCATG ACTTTCAATT AGGCACGGCG GAAGTGGCGT CATTGGCATT GGCGGCTATG GGCGAAGAGG CCAATGCCAA GGCATTAACG GCATGGTTCG ATCTCTTTGT TGAGTCATCA TTGCTAGGAC GTAACCGCCG CTGCCGTGAA GACATTTTAC CCATCAGCGA TTTTACCGAC GCCTTTGAAG CGGCTTACCA TGCTGCAACG CCTACCAGCA ATTAA
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Protein sequence | MALAPHAVHR LYEYRKSLST KPFGARGKKL IRCHLCLLGE QFCTCSLRKQ LTTQASFILI MYNDEVLKPT NSGRLIADLI PDTHAFLWSR TEPAPELLAL LASSDYQPFL VFPAQYADQG QTVLTEVPMA SLAEGKRPLL IMLDGSWREA IKMFRKSTYL QGLPMLSFDP DTLATYALRK GSHDFQLGTA EVASLALAAM GEEANAKALT AWFDLFVESS LLGRNRRCRE DILPISDFTD AFEAAYHAAT PTSN
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