| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1937 |
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| Symbol | ampC |
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| ID | 4252511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2308205 |
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| End bp | 2309458 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118548 |
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| Product | beta-lactamase |
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| Protein accession | YP_734068 |
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| Protein GI | 113970275 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.87216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000051216 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTACAT TTAGTCAGTC CCTCCTAAGA CATCCCCATA ATGCCCGATT TTCAGGTCAA
TTGAGTTCAA ATCGTTTGGG GCCAACCGCG TTAGGCTTAT TGCTGCTCTC GACTACGCCA
TTGTTAACCT ATGCAGCATC AGATGCGCGC AATGCGGAAC ACCTACAAAC AGAGCAGATC
CAAGCCCTTG TAGATTCGGC GGTTAATCCC TTAATGACAG AGTATGGGAT CCCAGGTGCA
ATCGTTGGGA TCAGCCTCAA TGGGCAAAGG TATTTCTTCC CCTATGGTGT TAGCTCTAAG
ACCAGCAATC AAAGAGTCAG TACAAACACA TTGTTTGAGA TAGGTTCCAT CAGTAAAACC
TTTACCGCGA CACTCGCAAC TTATGCTCAA GTTCAAGGGA AACTCACACT CACGGATAAG
GTGAGTGAGT ATGTGCCCGA ATTAAGGGGC AGTGCTTTTG ACCAGATAAA TCTTATCAAT
CTCGCGACCC ATACCGCGGG CGATTTGCCC ATGCAAGTGC CTGATAAGGT GACCAACAAT
GTTGAATTAA TGCGTTATTT TAAAGAATGG CAACCCGCTT ATGCCGCGGG AACACACCGT
AACTATGCCA ATCCCAGCAT TGGCTTACTC GGCTTAATTG CGGCAAAACA GTTGGGGCAA
AGCTTTACTG AGGCCATGGA ACAAACCGTC TTTCCACAAC TTGGCATGAC TAGCAGTTAT
CTTAAGGTGC CAACAAATAA AATGGTTGAT TATGCCCAAG GTTATAATAA GCAAGACCAG
CCGGTGCGTC TTAATCCCGG CGTATTGGCC GATGAGGCTT ACGGAATAAA AACATCTGCC
GTCGATCTAC TGCGTTTTGT TGAGACTAAT ATGCAACAGC ATACTATTTC TAACACGCTG
CAACAGGCTA TCGATGCCAC ACATATGGGC TATTTTGATG TGGGCATGAT GACACAAGAG
ATGATTTGGG AGCATTATCC CTATCCAATA ACCCTCGACA AGCTACTTGC GGGACATACT
CAAGATGTAG TGTTTGGTAG CATGCCAGTT AAAGCCATCG AGCCGCGACA GGTACAACAG
TCTGATCAGT GGGTAAATAA GACTGGCTCA ACCGGCGGTT TTGCCGCCTA TGTGGCTTAT
CTTCCCGCAA AAAAACTGGC CATGGTGTTA CTCAGTAATA AAAATTATCC CGTGCCCCCT
AGGGTGACTG TGGGCTACCA AATATTAACC AGTTTAGAAA CACTGCCAAA CTAA
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| Protein sequence | MSTFSQSLLR HPHNARFSGQ LSSNRLGPTA LGLLLLSTTP LLTYAASDAR NAEHLQTEQI
QALVDSAVNP LMTEYGIPGA IVGISLNGQR YFFPYGVSSK TSNQRVSTNT LFEIGSISKT
FTATLATYAQ VQGKLTLTDK VSEYVPELRG SAFDQINLIN LATHTAGDLP MQVPDKVTNN
VELMRYFKEW QPAYAAGTHR NYANPSIGLL GLIAAKQLGQ SFTEAMEQTV FPQLGMTSSY
LKVPTNKMVD YAQGYNKQDQ PVRLNPGVLA DEAYGIKTSA VDLLRFVETN MQQHTISNTL
QQAIDATHMG YFDVGMMTQE MIWEHYPYPI TLDKLLAGHT QDVVFGSMPV KAIEPRQVQQ
SDQWVNKTGS TGGFAAYVAY LPAKKLAMVL LSNKNYPVPP RVTVGYQILT SLETLPN
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