Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1927 |
Symbol | |
ID | 4252501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2297290 |
End bp | 2298450 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638118538 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_734058 |
Protein GI | 113970265 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000214151 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000455272 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTTGAGA TCCTCTTCCT GTTGCTCCCT ATTGCTGCCG GTTACGGCTG GTATATGGGG CGGCGGAGCA TAAGGCAAAA CCAGAGTAAT CAGCGTAAAC AATTAAGTCG TGATTATTTC ACCGGCTTAA ATTTCCTGTT GTCGAACGAG TCAGACAAAG CGGTCGACTT GTTTATCAGT ATGCTCGATG TGGATGATGA AACTATCGAT ACCCATCTTT CCCTCGGTTC GTTATTTCGC AAACGCGGTG AAGTTGACCG TTCCATTCGT ATCCATCAGA ACTTAATTGC ACGACCAACG CTCACCAATG AGCAGCGCGA TATGGCTATG ATGGAACTGG GTAAAGATTA CCTTGCCGCA GGGTTTTACG ACCGCGCTGA GGAAATTTTC TTGAATTTAG TGAGTCAAGA TGATCACAGT GAAGAGTCTG AAACTCAGCT GATTGCCATT TATCAGGTGA TTAAGGAATG GCAAAAAGCC ATCGACATCA CCAAACGCTT AAGCCGTAAG CGTCAGCAGG CACTCAAACC GATTATTGCC CATTTTTATT GCCAGCTTGC GGATGAATCC GGGGATGATG CGGATAAAAT AAAGCTGCTG CAACAGGCAT TAAAACAAGA TCCTAAGTGC GGCCGAGCCT TGCTCACGCT CGCCAAAAAA TTTCTCGATG CTAAGGATTA CACCCAGTGT AAATCCATGC TGATGGCACT GAAAAAAGCC GATATAGAAC TCTTTGCCGA TGCTTTGCCC ACCGCGAAAC AAGTGTATCG CGATACCCAA GATAAAGAGG GTTATCAAGA ATTATTAGCG GGTGCTATGG CCGAAGGGGC GGGAGCCTCT GTGGTGGTAG CGCTTGCTCA ACATATGATT AGTCTCGATG AGATAAAGGC CGCTGAAAAC ATGGTATTGG ATGCCCTGTA TCGCCATCCC ACCATGAAGG GATTTCAGCA CTTAATGCAG ATGCACCTGC GTCAAGCCGA AGAAGGGCAA GCCAAACAAA GTTTGACTAT GCTTGAGCAA CTCGTTGAAC AACAAATTAA ATTCCGTCCA AGTTATCGCT GTAAAGAATG CGGTTTTCCA TCCCACACAC TTTATTGGCA TTGTCCCTCC TGTAAAAAAT GGGGCACCAT TAAACGGATC CGTGGTTTAG ACGGTGAATA A
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Protein sequence | MLEILFLLLP IAAGYGWYMG RRSIRQNQSN QRKQLSRDYF TGLNFLLSNE SDKAVDLFIS MLDVDDETID THLSLGSLFR KRGEVDRSIR IHQNLIARPT LTNEQRDMAM MELGKDYLAA GFYDRAEEIF LNLVSQDDHS EESETQLIAI YQVIKEWQKA IDITKRLSRK RQQALKPIIA HFYCQLADES GDDADKIKLL QQALKQDPKC GRALLTLAKK FLDAKDYTQC KSMLMALKKA DIELFADALP TAKQVYRDTQ DKEGYQELLA GAMAEGAGAS VVVALAQHMI SLDEIKAAEN MVLDALYRHP TMKGFQHLMQ MHLRQAEEGQ AKQSLTMLEQ LVEQQIKFRP SYRCKECGFP SHTLYWHCPS CKKWGTIKRI RGLDGE
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