| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1919 |
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| Symbol | |
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| ID | 4252493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2286682 |
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| End bp | 2289522 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118530 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_734050 |
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| Protein GI | 113970257 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000233211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000296006 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAATC ACGTTTTTGG GCCGCTCAAT GATACGGATT ATGCGTTGTC GGCTAATTTT
CAGGGGAACG AGCAGTTTAT GACTGATCTG GCATCATCTA TTTCGCCAAT TAATATCGAA
GACGAACTAA AGAATTCGTA CCTTGATTAC GCCATGAGCG TCATCGTGGG ACGTGCATTA
CCAGACGTGC GTGATGGCCT CAAGCCTGTG CATCGCCGCG TGCTGTTTGC CATGAGTGAA
TTGAAGAACG ATTGGAACAA GCCGTACAAA AAGTCTGCCC GTGTGGTTGG TGACGTGATC
GGTAAATATC ACCCCCATGG TGATTCAGCG GTTTACGATA CAATCGTACG TATGGCTCAG
CCTTTCTCTC TGCGTTACAC CTTAGTCGAT GGTCAAGGAA ACTTCGGTTC GGTTGACGGT
GACTCCGCAG CGGCAATGCG TTATACCGAA ATCCGTATGG ATAAGTTAGC GCACCAGCTC
CTCGCCGATC TTGAAAAAGA AACCGTTGAC TATGTGCCAA ACTACGACGG CACTGAACAA
ATTCCTGCGG TATTACCGAC ACGCGTACCT AACCTGTTGA TCAACGGTTC ATCGGGTATT
GCGGTAGGTA TGGCGACTAA CATTCCGCCC CATAACTTAA CCGAAGTCGT TAAGGGCTGT
TTAGCGCTGA TCGCCGATCC TGCGCTGTCT ATTGAACAGC TGATGGAACA TATTCCAGGC
CCGGACTTCC CAACGGCTGC GATTATCAAT GGCCGTAAGG GCATTATCGA TGCCTATAAA
ACAGGCCGCG GCCGTGCTGT CATGCGCGCG CTGGCTGAAG TCGAAACTGA AGACAACGGC
CGTGAACGTA TTATCGTCAC CGAAATCCCT TATCAGGTGA ACAAGGCGAA ACTCATCGAG
AAAATCGCTG AGTTAGTCAA AGATAAGAAG ATTGAAGGCA TCAGCGGTCT GCGCGACGAG
TCTGACAAAG ACGGTATGCG CATCGTTATC GAAATCAAAC GCGGTGAAGT GGGTGAAGTT
GTCCTGAACA ATCTCTATGC CCAGACACAG ATGCAATGTT CTTTTGGTAT CAACATGGTG
GCATTGACCA ATGGTCAGCC TAAGTTGTTC AACTTAAAAG AAATGCTCGA GTGCTTTATC
CTGCACCGCC GTGAAGTGGT GACTCGTCGT ACCGTATTCG AACTGCGTAA AGCGCGAGAA
CGCGCCCATA TTCTTGAGGC ATTAGCGGTT GCGCTGGCCA ACATCGACCC GATTATTGCG
CTGATCAAAG CTTCGCCAAC GCCAGCAGAC GCTAAAGTCA AACTGGTTGA GCAGGGCTGG
GCACTTGGCC ATGTACAGGG CATGCTTGAA AAAGCGGGTG ACGATGCGGC GCGTCCTGAA
TGGTTAGAGC CAGAATTCGG TATCCGTGAT GGCTTATATT ACCTGACTGA GCAACAGGCT
CAGGCGATTC TAGAGCTGCG TTTACACCGT TTAACTGGTC TTGAGCACGA TAAGATCATC
GCCGAATACG AAGAACTGCT CGAGTTCATC GCGGGTCTGC TGTTTATTCT GCGCAGCCCT
GAGCGTTTGA TGGAAGTGAT CAAAGAAGAG CTAGAAGAAA TTCTTGCTGA ATACGGTGAT
GCTCGCCGCA CTGTCATCAA CGCCAATGAA ATTGATATGA GTCTTGAAGA CTTAATCAAC
GAAGAAGACG TGGTTGTGAC CCTGTCACAC TTAGGTTACG CCAAGTACCA ACCGCTGAGC
GATTATCAAG CCCAGCGCCG TGGTGGTAAG GGTAAAGCCG CAACTAAGGT GAAAGACGAA
GATTTCGTTG AAAAACTGCT GGTTGCCAAC ACTCACGATA CCATTTTGTG CTTCTCAGAT
TTCGGTAAGA TGTACTGGCT TAAGGTCTAT CAATTACCGC TGGCGAGCCG TACTTCCCGT
GGTCGTCCGA TTGTTAACTT ACTGCCGCTG TCCGATGGTG AACGCATTAC TGCGATTCTA
CCAGTGCGTG AATACGCAGA AGATAAGTAC ATTATCATGG CGACCTCTAA CGGTACCGTG
AAGAAAACTG CGCTGACAGC TTATAGCAAC CCACGTGCTA ACGGCATTAT CGCCGTGAAC
CTGAAAGACG GTGACCAACT GATCGGTGTC GATATCACCA ACGGTGATGA TGAGATCATG
TTGTTCTCGA ACGAAGGTAA AGTGGTTCGC TTTAAAGAAG GCGAAGAAGT GTCCGTACTC
GATGAAAACG GCAACCCAGT GCTGGATGAA GAAGGTAACC CACAAATCAA CTTCAAGGGC
GTGCGTCCAA TGGGTCGCGG CGCGACCGGT GTTCGCGGTA TCAAGCTTGA AGAAGGTCAA
AAAGTGGTGT CTCTCATCGT ACCTAAGGGC GATGGCGCTA TCTTAACCGT GACCGAAAAC
GGCTATGGTA AACGTACTGA ACTGTCTGAA TACCCATCTA AGAGCCGCGC GACTAAAGGT
GTGGTATCGA TCAAGGTGAG TGAGCGTAAC GGTGCGGTTG TTGGCGCGGT ACAAGTTGGC
GGTAATGACG AAATCATGCT GATCAGCGAT AAAGGTACCT TAGTCCGTAC GCCTGCGAAC
GGTGTGTCAA TCATCGGCCG TAACACCCAA GGTGTGACCA TTATCCGTAC GGCTAGTGAT
GAGAAAGTGG TTGGTCTGCA ACGTATCGAT GAGATCCAAG GCGACGAAGA TGAAGTCGAG
CTGGATGAAA ACGGTATGCC AATCGTCCCA GTTGTCGCTG AAGGTAACTC TGTTCATGAA
GAGCCTTTAG AAGAGGAACT GGAAGAAGAA TTAGACGAAG ACGAAGACGA AGAGCTTGAC
GACGAGCAAG ACGAAGACTA A
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| Protein sequence | MPNHVFGPLN DTDYALSANF QGNEQFMTDL ASSISPINIE DELKNSYLDY AMSVIVGRAL
PDVRDGLKPV HRRVLFAMSE LKNDWNKPYK KSARVVGDVI GKYHPHGDSA VYDTIVRMAQ
PFSLRYTLVD GQGNFGSVDG DSAAAMRYTE IRMDKLAHQL LADLEKETVD YVPNYDGTEQ
IPAVLPTRVP NLLINGSSGI AVGMATNIPP HNLTEVVKGC LALIADPALS IEQLMEHIPG
PDFPTAAIIN GRKGIIDAYK TGRGRAVMRA LAEVETEDNG RERIIVTEIP YQVNKAKLIE
KIAELVKDKK IEGISGLRDE SDKDGMRIVI EIKRGEVGEV VLNNLYAQTQ MQCSFGINMV
ALTNGQPKLF NLKEMLECFI LHRREVVTRR TVFELRKARE RAHILEALAV ALANIDPIIA
LIKASPTPAD AKVKLVEQGW ALGHVQGMLE KAGDDAARPE WLEPEFGIRD GLYYLTEQQA
QAILELRLHR LTGLEHDKII AEYEELLEFI AGLLFILRSP ERLMEVIKEE LEEILAEYGD
ARRTVINANE IDMSLEDLIN EEDVVVTLSH LGYAKYQPLS DYQAQRRGGK GKAATKVKDE
DFVEKLLVAN THDTILCFSD FGKMYWLKVY QLPLASRTSR GRPIVNLLPL SDGERITAIL
PVREYAEDKY IIMATSNGTV KKTALTAYSN PRANGIIAVN LKDGDQLIGV DITNGDDEIM
LFSNEGKVVR FKEGEEVSVL DENGNPVLDE EGNPQINFKG VRPMGRGATG VRGIKLEEGQ
KVVSLIVPKG DGAILTVTEN GYGKRTELSE YPSKSRATKG VVSIKVSERN GAVVGAVQVG
GNDEIMLISD KGTLVRTPAN GVSIIGRNTQ GVTIIRTASD EKVVGLQRID EIQGDEDEVE
LDENGMPIVP VVAEGNSVHE EPLEEELEEE LDEDEDEELD DEQDED
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