Gene Shewmr4_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1884 
Symbol 
ID4252458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2244472 
End bp2244675 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content43% 
IMG OID638118495 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_734015 
Protein GI113970222 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAA TTCATCTCAA TAATGTGCCC CAAACACTGC AACAACCGCT GAGTTTACAA 
GCCTTGTTAG AAGCACAAAA TATTTGCCAA CACTCGGTTG CCTTAGTGCT TAATGAGGCC
GTTGTGCCAA AACACCGATG GTCATCTATC CAGTGCCAAA ACGAGGATAA GATTGATGTA
TTTGCCGTTG TCGCGGGAGG TTAA
 
Protein sequence
MILIHLNNVP QTLQQPLSLQ ALLEAQNICQ HSVALVLNEA VVPKHRWSSI QCQNEDKIDV 
FAVVAGG