| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1846 |
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| Symbol | |
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| ID | 4252420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2195186 |
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| End bp | 2196955 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638118457 |
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| Product | ATP-dependent OLD family endonuclease |
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| Protein accession | YP_733977 |
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| Protein GI | 113970184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000147928 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAATTG AAAGTATATG GATTAAAAAC TGGCGTTCCG TAAAAGAAGA AAAACTCAGA
GCCCAAGATC TGATGGTTAT TATTGGCCAA AATAACCACG GAAAATCGAA CCTTTTGTCT
TCCGTCTTGT TCTTCTTTGG CGAGGTTAAG CAACAAGATC TAGATTTCTA TCATGGCTCC
ACTGAACTAT TTGTGGAAAT TGAGTTTGGT GACCTTGATG AATCAGACAA AACTACTTTC
AAGAAATATT TAACCTCCGA AGGAAAAATA GTTGTAAGAA AAACCGCCTT TTTAGGCGGC
AGTTTTGAAT ACCGAGGATA CATAGAAAAT CCATCAGAGG ACTGGCTTCA AGAAGCTAAT
GCTTCTGCTT ACACAAATAG AGAGCTTGCT TCCAGCCTTC CATTTCACCC CTATATCCCG
GATTCTGGCC GTATTACCAA ACAAAATATA ATCGATGCCC AAAATGAATA TATCCAGACC
AACATGGGAA ATATTCAATT CTCTTTTGAA CTTGAGACAA CAAATTTTCT TGGGTTGAAA
AGTGTCGCAA AGGGGATATT TGGTGAGGTT TACTTTATAC CTGCGGTAAA AGAAGCTTCG
GATGATTTTT CTTCTAAAGA TTCTAGTGTT TTCGGGAAAA TGTATGCCGA TGTTGTCGCT
TTGATGTCCG AGCATAACAA TGAATGGAAG GAAACAAAAG AAAAACTTGG TAAATTATTT
TCCACTCTTA ACAAAAAAGA TCGTGAAGGC AATGAGAATA ATGATAGACC CAAGCAATTA
ACTGACTTTG AAAAAGAGTT AACTGATGAG CTTATTGCGT GGGGTGCAAA AGTAGATATT
GAAGTAAGCA ACCCTGATAT TGAAAGTGTA TTTAAAGCAA ACACTCAGGT TTGGGTTGAT
GACGGTGTTA GAACAGATAT AAAACGAAAG GGGCACGGTT TACAGCGAGC TCTGACCGTT
GCGTTAATAC AAGTAGTTGC TAAGAAGGCT TTTGCAGAGG CTGAGTTGGC AGAAGAACAA
GGTAATAGAA AAGCATCAAA TTCTAGGTAT TTTATATTTG AAGAGCCTGA GCTTTATCTG
CATCCTCAAG CACAAAGGTC ATTATTCGAT TCATTCGTTG CTTTGTCTGA GTCAGGGAGT
CAAGTTATCC TCTGTACTCA CTCAAGCGGT TTAATTGATG TTGAGCGTTA TAAGTCTATT
TACATAGCAA CTAAAAACGA TGAGTTAAAC GGAACAAAAG TTAAGCAATG CACTGAAGAT
TTATTTGAAG GAGATTCAAA AAAAGATTTC AATCTTTCCT ACTGGATTAA TCCTGACCGT
GGCGAGTTAT TTTTTGCCAG TAAAGTTGTT TTGCTAGAAG GGGCTACTGA AAAAACTGTA
TTTCCTCTAT TGGCTAAGGA ACTCGGTGTT TTTAAGTACG AATATACGTT AATCGATTGC
GGCTCAAAAG ATAATATCCC TCTTTACGTT AAGCTTATGA ATAAATTTTC TATCCCATAT
GTAGCTGTTT ATGATCGAGA TCATCAAGCC CACAAAGGGG TAGACGCAAT TGCATCAGCA
GATCGATCAA CACAAAAAAT TGTCGATGAG ATTGATGTCA ATATAGGTTC ATCGGTGGTG
TTAGAGAACG ATATAGAAGA AGAACTTGGC TTGCCGAATG GTGGTAGTAG CAAACCTTAT
GTAGCACTAA GTCACATTAC CGCAGAAGGT TTTACAGTCA CTCCACAAAT GGAACAAAAA
ATCAGAAAAA TTTATGACGC AGAGGCCTAA
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| Protein sequence | MKIESIWIKN WRSVKEEKLR AQDLMVIIGQ NNHGKSNLLS SVLFFFGEVK QQDLDFYHGS
TELFVEIEFG DLDESDKTTF KKYLTSEGKI VVRKTAFLGG SFEYRGYIEN PSEDWLQEAN
ASAYTNRELA SSLPFHPYIP DSGRITKQNI IDAQNEYIQT NMGNIQFSFE LETTNFLGLK
SVAKGIFGEV YFIPAVKEAS DDFSSKDSSV FGKMYADVVA LMSEHNNEWK ETKEKLGKLF
STLNKKDREG NENNDRPKQL TDFEKELTDE LIAWGAKVDI EVSNPDIESV FKANTQVWVD
DGVRTDIKRK GHGLQRALTV ALIQVVAKKA FAEAELAEEQ GNRKASNSRY FIFEEPELYL
HPQAQRSLFD SFVALSESGS QVILCTHSSG LIDVERYKSI YIATKNDELN GTKVKQCTED
LFEGDSKKDF NLSYWINPDR GELFFASKVV LLEGATEKTV FPLLAKELGV FKYEYTLIDC
GSKDNIPLYV KLMNKFSIPY VAVYDRDHQA HKGVDAIASA DRSTQKIVDE IDVNIGSSVV
LENDIEEELG LPNGGSSKPY VALSHITAEG FTVTPQMEQK IRKIYDAEA
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