| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1827 |
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| Symbol | |
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| ID | 4252401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2167332 |
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| End bp | 2167991 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118438 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_733958 |
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| Protein GI | 113970165 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00738443 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATCA TGTTAGTGGA AGACAACGAA TTATTAGCCC AAGGGATCTG CCTGAGCCTT
GCCAAACTGG GGATGCAGGT CGATCACCTA AGTAGCTATC AGCAAGCATT AGTGGGCATT
AAGAATGAAA CCTTTAGCGC CATAGTGCTC GATTTAGGTC TACCGGATGG TAATGGTAAA
GAGTTGTTAA AAGCCTGGCG TGCAGAGGGT GTCTCGATTC CGACGATAGT GCTGACGGCA
AACACAGATT TCGATACAAA ACTCGAGTGC CTCGATATTG GCGCCGATGA TTATTTAGGT
AAACCCTTCG ATGTGCGTGA GTTAGCCGCA CGGATCCGAG CTATCGTCCG CCGTCAATAT
GGTCTGGATA ATAACAGTTT GAATATCGGT GCATTAAGTA TTGATCTCAA CACCCGCGAG
GTGACGTTTC GCGATCAAAA TGTGCCCCTC TCTCGCCGGG AATTTCAACT TCTGCTCGAA
CTGGCCCAAT CCGCTGGCCG AGTGTTAACC CGCAGTCAGT TAGAACAGCT AACCTATGGT
TGGGATGAAG TCGGCAGCAA CTCGATAGAA GTGCATATCC ATCACTTACG TAAAAAAATG
GCCAATGAAT TGATTAAGAC GGTGCGCGGC ATTGGCTATA CCTTAACCGA AGTCAATTAA
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| Protein sequence | MRIMLVEDNE LLAQGICLSL AKLGMQVDHL SSYQQALVGI KNETFSAIVL DLGLPDGNGK
ELLKAWRAEG VSIPTIVLTA NTDFDTKLEC LDIGADDYLG KPFDVRELAA RIRAIVRRQY
GLDNNSLNIG ALSIDLNTRE VTFRDQNVPL SRREFQLLLE LAQSAGRVLT RSQLEQLTYG
WDEVGSNSIE VHIHHLRKKM ANELIKTVRG IGYTLTEVN
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