| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1814 |
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| Symbol | |
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| ID | 4252388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2152853 |
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| End bp | 2153992 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118425 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_733945 |
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| Protein GI | 113970152 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC TAAAACAACT TTATCAAGGC TTTCGCGACC CCGATACCAT AGCCTCGTTT
GCGGAGGATA TCGCTAAATG CGCCCGCACA CTCAAAGAGC CTATCAATAT CATGGAGGTC
TGTGGCGGCC ATACCCACAC CATCATGAAA TACGGCTTAC TGGATTTATT GCCGGAAAAT
ATTGAATTTA TCCACGGTCC CGGCTGCCCA GTGTGCGTCA TGCCCAAGGA ACGAATTGAC
CAAGCCGCAG TGCTCGCCCA ACAAGAGAAT GTGATTTTAG TGACCCTAGG GGATATGATC
CGCGTCCCCG GCTCCCAAGG GTCACTTGCC AGTTTCAGGG CCAAGGGCTG TGATATTCGC
CCTATCTATG ACCCTTTAGA CACGCTCAAA ATCGCCCGCG ACAATCCCGA TAAAACCGTG
GTGTTTTTCG CCATTGGCTT TGAAACCTCG ACCCCAATGA CCGCGGTGCT GCTGCAACTG
GCCGAGCAGG AAAAGCTGGC GAATTTGTTG TTTCATATCA ACCACGTCTT AGTTCCACCC
GCGATAGATG CCGTGATGCA CGACCCTAAA GCTAGGGTCA ATGCCTTTAT TGGGCCTGCG
CATGTCAGTG TGATCAGTGG CGCCAAAATC TATCGCCCCG CGGTCGAGCA ATACGGTACG
CCTGTGGTGG TATCCGGGTT CGAACCCGTC GATGTGATGG AATCCATCCT GCGCATCGTG
CGGCAAAAGG TGGCGGGAAC GGCGCTATTA GATATCCAAT ACAGCCGGGC TGTGTCCGAG
GAAGGCAATC TTGCCGCTCA GGCCAAGGTG GATCAGTTTT TCCAGACTCG GCCGCAATTT
CGTTGGCGCG GGCTTGGGCC CATACCCAAC TCGGCACTAG AGTTAAGACC CGAATACGCC
CACAGGGACG CCGAGAAGTA CTTTAAGGAC AGATTACCCG TCAAAGAGAT AGACGATCAT
AAGGCTTGCC AATGCGGCGA TATTCTTCGC GGGCTCGCCA AACCTAAGGA CTGTAAAGTC
TTTGGCCGCG GCTGCAATCC CGAAACCCCT CTCGGTAGCT GTATGGTTAG CTCCGAAGGC
GCGTGTAATG CGTATTACCG CTATCAAGGC ATAGATAGCA AGGAGCCACA TCATGGCTGA
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| Protein sequence | MLDLKQLYQG FRDPDTIASF AEDIAKCART LKEPINIMEV CGGHTHTIMK YGLLDLLPEN
IEFIHGPGCP VCVMPKERID QAAVLAQQEN VILVTLGDMI RVPGSQGSLA SFRAKGCDIR
PIYDPLDTLK IARDNPDKTV VFFAIGFETS TPMTAVLLQL AEQEKLANLL FHINHVLVPP
AIDAVMHDPK ARVNAFIGPA HVSVISGAKI YRPAVEQYGT PVVVSGFEPV DVMESILRIV
RQKVAGTALL DIQYSRAVSE EGNLAAQAKV DQFFQTRPQF RWRGLGPIPN SALELRPEYA
HRDAEKYFKD RLPVKEIDDH KACQCGDILR GLAKPKDCKV FGRGCNPETP LGSCMVSSEG
ACNAYYRYQG IDSKEPHHG
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