Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1813 |
Symbol | |
ID | 4252387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2151841 |
End bp | 2152860 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638118424 |
Product | hydrogenase expression/formation protein HypE |
Protein accession | YP_733944 |
Protein GI | 113970151 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0309] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TCCAAACCAA AGATAAAGCG ATTCAACTCA GCCACGGTGG TGGCGGCAAA GAGATGAATA AACTCATTCG TGAACTGTTT TTTGCCGAGT TCGATAACCC GATCCTGCGT AGCGAAGAAG ACGCGGCCAA GCTTGAATTG CAGGGCGCGA CCGCCTTTAC CACAGATTCC TTTACCGTAT CACCACTGTT TTTTGCTGGC GGAGACATAG GCAAATTGGC GATCGCCGGC ACTGTGAATG ATCTCGCCAT GATGGGCGCC GAGCCACAGT ATTTAAGTTG CAGCGTGATC ATCGAAGAAG GCTTTTCGCT CAATCAGTTA ACCACTATTG TGCGCAGCAT GGCGAAGGAG CTTAAACAGA GCGGCGCCAG AATCGTCTGT GGCGATACCA AAGTCGTGCC TAAGGGCTGC GCCGATGGCT TGTTTATCAA TACCTCAGGC GTTGGGCGCA TTTTACGTCC GAATATCTCG GCGGCGAATG TCGCACCGGG GGATGCAATC ATTGTCTCCC GCGATGTGGG CTGCCATGGC GCCGCGATTC TGATGGCGCG CGAAGGTCTG ACCCTCGAAT CAGCTTTGCA AAGCGATTGT GCCACTCTTT GGCCCGTGGT TGAGCAGCTT ATTGCGGCGA ATATTCCTAT TCATGCGATG CGTGATGCGA CCCGTGGCGG GCTTTCAGCC GTGTTAAACG AATGGGCGGC GGCCGCCAAT GTCGGGATAA CGGTCAATGA AGCCAGTATT CCGGTTTGCG ATGAAGTCAA AGGCTTGTGC GAACTCTATG GCTTTGAGGC CATGGATTTA GCCAATGAAG GCACCTTTAT CTTGGCGGTC CCTAACGATA TCGCCCTAGG CGCCTTAGAA ATCATGCAGC GCTTTGGTCA TTGCGAGCAG GCGGCCATCA TCGGCACCGT CAGCGACGAA CTTCCAGGAA AAGTGATCTT AAGAACGCCA TGGAATACCA AACGTTACTT AGACCTGCCC CAGGGTGAAC TGCTGCCAAG GATTTGTTAA
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Protein sequence | MADFQTKDKA IQLSHGGGGK EMNKLIRELF FAEFDNPILR SEEDAAKLEL QGATAFTTDS FTVSPLFFAG GDIGKLAIAG TVNDLAMMGA EPQYLSCSVI IEEGFSLNQL TTIVRSMAKE LKQSGARIVC GDTKVVPKGC ADGLFINTSG VGRILRPNIS AANVAPGDAI IVSRDVGCHG AAILMAREGL TLESALQSDC ATLWPVVEQL IAANIPIHAM RDATRGGLSA VLNEWAAAAN VGITVNEASI PVCDEVKGLC ELYGFEAMDL ANEGTFILAV PNDIALGALE IMQRFGHCEQ AAIIGTVSDE LPGKVILRTP WNTKRYLDLP QGELLPRIC
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