Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1808 |
Symbol | pheS |
ID | 4252382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2146615 |
End bp | 2147634 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118419 |
Product | phenylalanyl-tRNA synthetase subunit alpha |
Protein accession | YP_733939 |
Protein GI | 113970146 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.702278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTATCA AGCGCGACTA TGCAGTGGAA GAGAAAATGC AGCAGTTAAC TGAGATCGTA GAACAAGCCT TAGTCATTAT TGACCAGGCC AGTGATCTAA AAGCACTGGA TGATATCCGT GTCGATTACC TGGGTAAGAA GGGTAAGATC ACCGACATGA TGAAAATGAT GGGCAGCTTA AGTCCTGAAG AAAAACCCGC TTTTGGTCAG GCGGTCAATG ATGCGAAACA GGCCATTCAA CAGAAATTAA CTGAACGTAT CGACGGCCTG AAAAGTGCCG AGCTGGAGGC CAAATTAATC GCCGAAAAGA TTGATGTGAC GCTACCAGGC CGCACTATCG ATATCGGTGG TTTACACCCA GTGACGCGCA CCATTGAACG TATCGAAACC TTTTTTGGGG AATTAGGGTT TTCGGTAAAA CAAGGGCCAG AAATCGAAGA TGACTTCCAT AACTTTGACG CCTTGAATAT CTCTGAGCAC CACCCAGCGC GTGCCGACCA CGATACGTTC TATTTTAATC CTAAGCTGAT GCTGCGTACC CAAACCTCGG GCGTGCAGAT CCGTACCATG GAAACTGAAA AGCCGCCATT GCGGATTATT TCACCGGGTC GTGTGTATCG TAACGACTAC GACCAAACTC ACACGCCAAT GTTCCACCAA GTGGAAGGTT TGCTGGTGGA TGAAAACGTT AACTTCGCCG AATTAAAAGG TGTGTTACAC GACTTCCTGC GTAACTTCTT CGAGGAAGAT TTGCAGGTGC GTTTCCGTCC TTCTTATTTC CCATTTACTG AACCTTCAGC CGAAGTAGAC GTGATGGGTA AAAACGGCAA ATGGTTAGAA GTGTTAGGCT GCGGTATGGT GCACCCAAAT GTGCTACGTA GCGTGGGCAT CGATCCAGAA AAATACTCTG GTTTTGCTTT TGGTATGGGC GTTGAGCGTT TAACTATGCT GCGTTACGGC GTAAACGATC TACGTGCGTT TTTCGAAAAC GACCTGCGTT TCCTGAAGCA ATTTAAATAA
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Protein sequence | MFIKRDYAVE EKMQQLTEIV EQALVIIDQA SDLKALDDIR VDYLGKKGKI TDMMKMMGSL SPEEKPAFGQ AVNDAKQAIQ QKLTERIDGL KSAELEAKLI AEKIDVTLPG RTIDIGGLHP VTRTIERIET FFGELGFSVK QGPEIEDDFH NFDALNISEH HPARADHDTF YFNPKLMLRT QTSGVQIRTM ETEKPPLRII SPGRVYRNDY DQTHTPMFHQ VEGLLVDENV NFAELKGVLH DFLRNFFEED LQVRFRPSYF PFTEPSAEVD VMGKNGKWLE VLGCGMVHPN VLRSVGIDPE KYSGFAFGMG VERLTMLRYG VNDLRAFFEN DLRFLKQFK
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