Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1798 |
Symbol | |
ID | 4252372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2133719 |
End bp | 2134909 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638118409 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_733929 |
Protein GI | 113970136 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG TGCCAACTAG CCAAGCACCA ACGAGCAATG TGCCTGTGAC AAATATTCCG AGCGCCAATT GCGCCAGCAA TACTCTCGAC AACAATACTC TCGATAACAC AAGCATCGAG CCAACAACCC TTGCCGCCCG TCTTGCGCGG CCCGAGCTGC TCGAGTTAAC GCCTTACCAA AGTGCTCGCA GGCTGGGTGG TCGTGGGGAT ATTTGGATCA ACGCTAACGA ATCGCCCTTC AATAATGTGG CCGTTGCCGA ACTCGATTTA TCTAAGTTAA ATCGTTACCC CGAGTGCCAA CCGCCCGCGT TAATCAATGC CTATAGCCAA TATAGCGGTG TTGCGGAGAG CAAAATTGTC GCCAGCCGCG GCGCCGATGA GGCCATCGAG CTACTTATTC GTGCTTTTTG TATCCCAGGT ATCGACTCAA TTGCCACCTT TGGGCCCACT TACGGCATGT ACGCCATTAG CGCGCAAACC TTTAATGTGG GCGTTAAGGC ATTAAGCTTA ACGGCGGAGT ACTGTCTCCC AAGTGACTTT GCGACGGCCG CGCGCGGCGC TAAGTTAGTG TTTATCTGTA ATCCCAATAA CCCAACTGGC ACTGTGATTG AGAAGGCGCG CATAGAGCAA GCCATCCAAG CCCTGCCCGA CGCCATTGTT GTTGTCGATG AGGCTTATAT CGAGTTTTGC CCCGAATATA GCGTCGCCGA TTTACTCGAG TCTTACCCAA ACCTTGTGGT GCTACGCACT CTTTCAAAGG CCTTTGCCTT AGCGGGCGCG CGCTGCGGCT TTTTGCTCGC CAATGAAGAG ATTATCGAAA TCATCATGCG GGTGATTGCG CCCTATCCTG TGCCATTGCC CGTGAGTGAA GTGGCCGTGC AAGCACTATC AGCTGCTGGG ATTGCGCGGA TGAAAACCCA AGTCAAAGCG CTCAATGCTC AGGGCGAGCG ACTCGCGGCG GCGCTGAATT TGTACTGCGA ACAATGGGGC GGCGCCGTGC TAACACCCAA TGGCAACTAT GTACTCGCCG AATTCGACGA TGTGGCAAAA GTGGCACAGC TGCTTATCGA CAATGGCATT GTCGCGCGGG CCTATAAGGA CCCTAGATTG GCTAAAGCCA TTCGTTTTAG CTTTAGCTCT GAGGCTGACA CCGACCGCTT AGTGTCGCTA TTTGAATCGC AAAAGCTGTG A
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Protein sequence | MSQVPTSQAP TSNVPVTNIP SANCASNTLD NNTLDNTSIE PTTLAARLAR PELLELTPYQ SARRLGGRGD IWINANESPF NNVAVAELDL SKLNRYPECQ PPALINAYSQ YSGVAESKIV ASRGADEAIE LLIRAFCIPG IDSIATFGPT YGMYAISAQT FNVGVKALSL TAEYCLPSDF ATAARGAKLV FICNPNNPTG TVIEKARIEQ AIQALPDAIV VVDEAYIEFC PEYSVADLLE SYPNLVVLRT LSKAFALAGA RCGFLLANEE IIEIIMRVIA PYPVPLPVSE VAVQALSAAG IARMKTQVKA LNAQGERLAA ALNLYCEQWG GAVLTPNGNY VLAEFDDVAK VAQLLIDNGI VARAYKDPRL AKAIRFSFSS EADTDRLVSL FESQKL
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