| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1776 |
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| Symbol | |
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| ID | 4252350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2108758 |
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| End bp | 2110905 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118387 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_733907 |
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| Protein GI | 113970114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC AAACCTCGAC ACATCACAAG GCTAATCCTC CCAAACTGAC GAGCTATCAT
GCCAATGGGC CGCAGACGGG TGACAATATC AGCCGCCAAA CGCTGTTTTG GCTGCTGCTC
ACCAATATTG CGGTACTCAG CCCCCTATTC GATAAAACGA CGCCTTGGAC CCTTGGGATC
TGCGCCATCT GCCTCGTGTG GCGAGTCGGC ATCTATGTCG GTAAAGTGGC AAAGCCACCG
CGCTACTTAG TCACTAGCCT TGCCATTGGC GCCGCGATAA CCCTTGCGTT GGTATCGGGT
GAGATTGGGC TATTAAACGC CTTAGTCAAC CTGCTGATTT TAGGTTATGC CTTAAAATAC
ATTGAGATGC GCAGTGTCCG AGATGTGCGG GCCGTCGTGA TTGTGGGCTA CTTTTTAATT
GCGCTGACCT TTATCGATCA CCAATCCATG CTCAATACCG TGCATTTAAT TGGGGTCACT
ATCATCAATA CCTGCGTACT GGTGACCTTG TATCAAAGCA AACACAACTG GCAACACACA
GCTTGGATTG GCGCTAAATT ATTACTGCAG AGTGTGCCAC TGGCGTTACT GCTATTTTTA
GTCTTGCCGC GCTTTGCCCC GCTCTGGCTG GTCCCGAATA TGAAGGAAGC CCAAACTGGA
CTCTCGGATA CCCTTTCCGT GAGCGATATC AGCAAACTCA CCCGCTCCTC CGCACTGGCC
TTTAGGGTGA GCTTTACCGA GGCGAGGCCC ATCCAAGCCG AACTCTATTG GCGCGCGCTA
GTGCTAGAAG ATTACGACGG CCAAACCTGG CGCCAAGATG TCGGCATCAA ACAAATTCAA
AAGGATGCGC TGTTTTTTCC GCCCTCAAGA CCCGATCCCG CGCGGCAGCT CCCCACAGCG
AAGACGGATG ATGCAGGCAG TCATGCGCCG CAGCGATACG ACTATCAAGT GATTGTGGAA
CCTAGCCACC AGCCTTGGTT ATTTGGGCTC GATGTGGCCT ATAGCCAAGA TGAAAAGGTC
ATTAACCTAC CCGATTATCG ACTCTATTCC CTACGTAATG TCGATCAGCG CTTGGGCTAC
AGTGCCCGTT CTTGGCCCAA GGCCCAAATG GATCTCAAGT TAACTGCCAA ACAGCGGCAA
ATAAACCTGA AACTGCCCGA GGACACTAAC CCCAAAACTC TGGCGCTCGC CGGCGAGTTT
AAGGCCAACT ATCCCGAGCC CAAGCAGCGT CTGCTCGCCA TGATGGGTTA TTTTAATCGC
GAACCGTTTT TCTACACCCT CACCCCGCCG CCCATTGGCC CGCAGCAAGT CGATGATTTT
CTGTTTGAAA ATAAAGCTGG ATTTTGCGCC CATTACGCCT CCGCCTTTAT CTTTATGGCG
CGCGCCACTG GCTTACCCGC ACGTATGGTC ACTGGCTATC AAGGGGGCGA ATACAACCCG
CAGGCCGATT ACCTGAGCGT GTATCAATAC ATGGCCCACG CTTGGGCCGA AGTCTGGCTC
GAAAATGAAG GTTGGGTACG ATTCGATCCA ACGGCCATGG TCGCGCCCAA TCGTATTGAG
CAAGGCTTCG ATGCCGAGTT CTCCCCCGAG CAAAGCTACC TGCAAGAAAG CCCCTTTAGC
AGCTTGCGCT TTAAATCAAT GCCTTGGCTC AACGAGTTGA GACAGCGCTT TGCCAGCCTT
GATTATTACT GGAGTCTCTG GGTGCTCGGT TTTAATCAGG AACGGCAAAA CAAAGTGCTA
AGTGGCATTT TAGGGGATGT CACTAAAACC AAGGTGGCGG TGTTTATGAG TGTGTGTATT
AGCCTTATCG GCCTCTATAT CGCCTATAGC GTGGGGCTGT TTCGCTTTAA ACGGGAGCAG
GATCCCATCA GCGCCAAGTA CCAACGCATT TGCCAGCGCC TCAGTAAATT TGGCATCGTC
CGCCCCGCTC ACCTTGGCCC GAACGCCTTT GCAGCACAGC TTATTGACAC GCACCAGCAA
CAATCCCCAG AGTTTTGCCG TGAGTTTGAC ACCCTGACCC AAAGCTATGT CGCGCTGAAA
TACCAACAGC TTGCGGACAA TGACTATCAA GTGGCGTTCA AGCGCTTTAA TGCCGCCGCT
AAAGCCCTTA ACTGGCGACT ATTTGGCCCG AGTAAACAGT TAAAATAG
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| Protein sequence | MTTQTSTHHK ANPPKLTSYH ANGPQTGDNI SRQTLFWLLL TNIAVLSPLF DKTTPWTLGI
CAICLVWRVG IYVGKVAKPP RYLVTSLAIG AAITLALVSG EIGLLNALVN LLILGYALKY
IEMRSVRDVR AVVIVGYFLI ALTFIDHQSM LNTVHLIGVT IINTCVLVTL YQSKHNWQHT
AWIGAKLLLQ SVPLALLLFL VLPRFAPLWL VPNMKEAQTG LSDTLSVSDI SKLTRSSALA
FRVSFTEARP IQAELYWRAL VLEDYDGQTW RQDVGIKQIQ KDALFFPPSR PDPARQLPTA
KTDDAGSHAP QRYDYQVIVE PSHQPWLFGL DVAYSQDEKV INLPDYRLYS LRNVDQRLGY
SARSWPKAQM DLKLTAKQRQ INLKLPEDTN PKTLALAGEF KANYPEPKQR LLAMMGYFNR
EPFFYTLTPP PIGPQQVDDF LFENKAGFCA HYASAFIFMA RATGLPARMV TGYQGGEYNP
QADYLSVYQY MAHAWAEVWL ENEGWVRFDP TAMVAPNRIE QGFDAEFSPE QSYLQESPFS
SLRFKSMPWL NELRQRFASL DYYWSLWVLG FNQERQNKVL SGILGDVTKT KVAVFMSVCI
SLIGLYIAYS VGLFRFKREQ DPISAKYQRI CQRLSKFGIV RPAHLGPNAF AAQLIDTHQQ
QSPEFCREFD TLTQSYVALK YQQLADNDYQ VAFKRFNAAA KALNWRLFGP SKQLK
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