Gene Shewmr4_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1741 
Symbol 
ID4252315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2068310 
End bp2068633 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content45% 
IMG OID638118352 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_733872 
Protein GI113970079 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000381054 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTA CAATGACCCC AGCGGCAACT GAGCGCGTCA GATCTTTCTT AGCGAATCGA 
GGCAAGGGCA TCGGCCTGCG CCTCGGCTTA AAGACTTCTG GCTGTTCCGG TATGGCTTAT
GTGCTTGAGT TTGTTGATGC GCTGAATGAT GACGATGAAG TGTATGATAT TGATGGTGTT
AAAATCATTA TCGATGCGAA AAGCTTTATC TATCTACAGG GCATTGAGTT GGATTTTGTT
AAAGAAGGCC TGAACGAAGG TTTCCAATTT AACAATCCTA ACGCAAAAGG TGAGTGCGGT
TGCGGTGAGA GTTTCACTGT TTAA
 
Protein sequence
MAITMTPAAT ERVRSFLANR GKGIGLRLGL KTSGCSGMAY VLEFVDALND DDEVYDIDGV 
KIIIDAKSFI YLQGIELDFV KEGLNEGFQF NNPNAKGECG CGESFTV