Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1738 |
Symbol | |
ID | 4252312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2066120 |
End bp | 2066581 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118349 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_733869 |
Protein GI | 113970076 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000171223 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTA CATCTAAAGG CCGTTATGCA GTAACCGCAA TGCTCGATGT GGCCATCCAC TCGGCTTCGG GACCGGTTCC CTTAGCGGAT ATCTCTGAAA GACAGGGGAT TTCGCTTTCC TATCTGGAAC AACTCTTCGC AAAGTTACGT AAACATGGCC TAGTGGCCAG TGTCCGTGGT CCAGGTGGTG GTTATCGCTT AGGCCTCGAA GCTAACGATA TTTCGGTTGG CATGGTTGTC CATGCCGTGG ACGAGTCTGT CGATGCGACT CGTTGTCAAG GATTAGGCAA TTGCCAGAGT GGAACTCGCT GCTTAACGCA CTCGCTCTGG GGCGATTTAA GCAAACAAAT TTCAGATTTT CTAGATGGTA TCAGTCTTGC TGGCTTAATG CAGAAACGAG ATGTGCAGTT TATCTCGCTT AAGCAAGACA CTATGCAAAA GGAGCAAAGA GTCAGCTTAT AG
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Protein sequence | MKLTSKGRYA VTAMLDVAIH SASGPVPLAD ISERQGISLS YLEQLFAKLR KHGLVASVRG PGGGYRLGLE ANDISVGMVV HAVDESVDAT RCQGLGNCQS GTRCLTHSLW GDLSKQISDF LDGISLAGLM QKRDVQFISL KQDTMQKEQR VSL
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