| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1716 |
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| Symbol | |
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| ID | 4252291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2035554 |
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| End bp | 2038751 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638118328 |
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| Product | ATPase-like protein |
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| Protein accession | YP_733848 |
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| Protein GI | 113970055 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00601254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTCAAG AAGTCATCAC CAAATTTTCC GATTCTGTTG TGGGTCGCAG CAATATTTTG
CAGCACATAG CCTGCATGCC CACCCCTCAA TTTGCTCAGC TGCCATTATC CTTACCCAAT
TCATCGTTAA AACTGTTACG TGTAGAAGGA ATTAATGATG AAAATCCAAG CGCATATAGG
CTGGCGTTGG CTAATGTTTA TGCTGCATTA GAGCATGAAG ATCAAATTCA GTTTGTTTAT
TTGCTTGATG TTAGTTTAGA AGGGGTTGCC CTTTATTTTG GGGTTAACCA GTTAACCTCT
GCAATTGATG GGCCTGGGCA TGAAGCGCTT AAAAATTTAC GCGGGGCGCT TGAGGGCCAA
TTACCAGGGA TTAATCTTTC TAAGCTAGAA AACATTGAGC CCTTGATGGC TCGTCTACAA
GAAAGTAAGC ATAAAGGTGT TGTACTTGGT ATTCCAACAG GAAAGAGTCA AGAGCAAGAC
AGTGACGAAG AAGACTATCA GGGTATTGAA AGACTTGTTA GAACTTTGCT TTCTGGTAGT
GGCAGTGATT CAGACAGTAT CAATTCTGCT AATTGGCAAA TGGTTGTGGT GACGCAACCT
TTAACTCGTA AAGATGCAAG AGTTTATCTA GATGGTGCCT ATGAACTGGC AAGCGAACTA
TCCATTCAGG TGAAAACCAG TGTTCAAGCG GGTAGTAATA ACAATGAGCA AAAGGGCAAT
AGTTTCAGCG AGGGGACATC GGATAGTACC AATACTGGGC GCACCGATAC TCGCAGCAAA
AGTGACGGTG TTTCGCAGAG TAAAAATATT GGAAAGAGCT CCAATGACAA TTCATCATCC
AATCACTCGT CAGGTACCTC TAGTAGCGAA ACTCAAGGCA AAAATTGGGG CACAAGTACC
AGTATTGCTG ATACTAAAGG CAGTAGCCAC TCAACGAGTG TTAATGAGAC CTATAATCTA
AATCGCTCTG CAGGGAACAA TATAGGTTTA ACTAAAGAAG TGACCGATAA ACGCGCCCAG
CATCTGCTCG ATCATATTGA AAAATCCCTT ATTCCTAGGT TGCAAAAGGG CGTAACTAAA
GGCTTATTTG GCACAGCCAT TTACCTTGCG GCGGATACGC CATCCAGTTA TCGCCGCTTA
AAAAATACCA TTTGTTCCAC CTATCAAGGG GGAGAAATCA CTGTTAGCCC ACTCGAAGTC
GTTGATCTGA ATGAAACCTC TGCCGCACAA CTATTACAGT TACCAACGTT AAAGCAATCA
CTTAACTATA GAAACGCTTT GTTTCACAGT ATCACTAGCA GTCATGAATC ACAGTTTTCG
ACGTTATTGA CAGCTGATGA ACTCGCTATG GTTGCAGGAT TACCACGGCA TGAGTTACCA
GGGCTGCGCC GGCGCAAAAC AGTAGAATTT ATTGTTGATT TACCAAGAGT TAAGGCCGAT
GATGCACTTA AGTTAGGGGC TGTTATTGAT CGAGGTCGTA AGCAACACAC TAATTCAATC
AACCTCAACA AGGCTGATTT TAATAAACAT ATCTTTGTGA CTGGGGTCAC TGGAGCGGGT
AAAACCACAA CCTGCCTTAA TTTATTAATT GAATCGGCAT TGCCTTTTTT AGTGATTGAA
CCCGCCAAAA CTGAGTACCG CGCCTTACAT CAACATATGC CTAATCAGGT GGCGTATTAT
CGTCCTAATG GCGATCAACA CCGTAGTTTG CGGCTCAATC CATTCGCATT GGTGCACCCG
AAGCAACATA TTCGAAGTCA CGCGTCATTT TTACGCAATG TATTTGCTGC GATTTTCCCG
ATGGAAGCCT CTATGCCCTT TTTAGTTGAG CAAGCGATTC TGCGTGCCTA CGAGGAAAAG
GGCTGGGATT TAACGGATAA CTCTTGTTTT TGTTGCGATG ATCCTTTTGA CCCAGCGGCG
CAGGTCTGGC CAACTATGGG AGATATGATC CGTCAACTTG ACCTGTTGAT CCCTGAACAA
GGAATGGGTA AAGAGTTTGA AGAAAAATAT CGCGGCTCTC TGGTTTCACG TTTGACCAGT
CTTACTCATG GCGTACTCGG GGATATTCTC AATGTGCCAC AATCGCTGAA TGTCGATGCG
CTACTTGATA ACAAGGTCGT TATTGAATTA GAAGAAATTA AAGATGGCGA AGGTAAGGCG
CTAATGATGG CGCTGTTGTT GGGCGCGGTC AGCGAAGCCA TCCGCTACAG GCATGGAAAA
GACAGCACAT TTCGTCACTT AACATTAATA GAAGAAGCTC ATCGTTTATT GGCAAAACCA
GAGCCTGGCG ATAAGGCGCG TGCAATGGCC GTTGACGCCT TTGCTGACTT ACTTGCTGAG
GTGCGTAAAT ACGGAGAAGG ATTGATTATT GCAGATCAAA TTCCAGCTAA GTTAGTGGCG
GATGTGATTA AAAATACTCA TACCAAAATT GTTCATCGTT TGTTTGCTGA GGACGATAGG
CGCGCAATGG GCGAAGCCAT GATGATGGAT GAGGCACAGC GTGATTATTT ACCTAATTTA
GCTACAGGTG AGGCGGTTAT TTTTTGTGGC GGATGGCATG GACCAGCTCA TGGGGCTATC
CGCGCAGATC TAGCGCAAAC CGATGGAGAT CCATTATCCG AGGATGATAT TAATCAACTG
GCAGTCAATC AGCTCTGGCA AGAGAGAGCC AGATATTATC CTACACTTAC TCACCTGGGC
TGGCTTACCC AAGAAGAACA TAAATTATCT TTTGCTGATT TTGTGCGCGC TGGGCGCAAG
GCATTGAATA TATTATTAGA ATTAACTCCA CCTATTTTGC AAAAGTCTAA TGTAATCGAG
TTAAAGCAGC TGAAACTTTC TGAGGCATTG AAGCTCTGGC TAGAGAAATG GCAGCCAATT
GCAGCGCAAA ATCCCGTCAA TCAAGATGAA TGGAGGAGGG GGGCAAATTT ACCATTGCCA
ACTCATCCTT TTACGGTGCT GCTACTCGCA TTGATGCAAG ATTGTCATCC AACCCTGCGT
ACAAAATCGA AAACAAATGC GATTTGGCCA TTTCCTGCCA CCGATTTTGC AATCTGGAGT
GAGGGTCTGT CAGCGATGCT TAATACACTA GCAACCAGTT CTGCTACTGA TGTTGTTAAA
AAGCTCACAG ACACAAAATC TAAGTGTGCT GAATTTGGAA CGGTTCTTGA CCAATTATCT
AATTATCAAA AATTTTAA
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| Protein sequence | MSQEVITKFS DSVVGRSNIL QHIACMPTPQ FAQLPLSLPN SSLKLLRVEG INDENPSAYR
LALANVYAAL EHEDQIQFVY LLDVSLEGVA LYFGVNQLTS AIDGPGHEAL KNLRGALEGQ
LPGINLSKLE NIEPLMARLQ ESKHKGVVLG IPTGKSQEQD SDEEDYQGIE RLVRTLLSGS
GSDSDSINSA NWQMVVVTQP LTRKDARVYL DGAYELASEL SIQVKTSVQA GSNNNEQKGN
SFSEGTSDST NTGRTDTRSK SDGVSQSKNI GKSSNDNSSS NHSSGTSSSE TQGKNWGTST
SIADTKGSSH STSVNETYNL NRSAGNNIGL TKEVTDKRAQ HLLDHIEKSL IPRLQKGVTK
GLFGTAIYLA ADTPSSYRRL KNTICSTYQG GEITVSPLEV VDLNETSAAQ LLQLPTLKQS
LNYRNALFHS ITSSHESQFS TLLTADELAM VAGLPRHELP GLRRRKTVEF IVDLPRVKAD
DALKLGAVID RGRKQHTNSI NLNKADFNKH IFVTGVTGAG KTTTCLNLLI ESALPFLVIE
PAKTEYRALH QHMPNQVAYY RPNGDQHRSL RLNPFALVHP KQHIRSHASF LRNVFAAIFP
MEASMPFLVE QAILRAYEEK GWDLTDNSCF CCDDPFDPAA QVWPTMGDMI RQLDLLIPEQ
GMGKEFEEKY RGSLVSRLTS LTHGVLGDIL NVPQSLNVDA LLDNKVVIEL EEIKDGEGKA
LMMALLLGAV SEAIRYRHGK DSTFRHLTLI EEAHRLLAKP EPGDKARAMA VDAFADLLAE
VRKYGEGLII ADQIPAKLVA DVIKNTHTKI VHRLFAEDDR RAMGEAMMMD EAQRDYLPNL
ATGEAVIFCG GWHGPAHGAI RADLAQTDGD PLSEDDINQL AVNQLWQERA RYYPTLTHLG
WLTQEEHKLS FADFVRAGRK ALNILLELTP PILQKSNVIE LKQLKLSEAL KLWLEKWQPI
AAQNPVNQDE WRRGANLPLP THPFTVLLLA LMQDCHPTLR TKSKTNAIWP FPATDFAIWS
EGLSAMLNTL ATSSATDVVK KLTDTKSKCA EFGTVLDQLS NYQKF
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