Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1682 |
Symbol | |
ID | 4252258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1992499 |
End bp | 1993032 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638118294 |
Product | hypothetical protein |
Protein accession | YP_733815 |
Protein GI | 113970022 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0455206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0971581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTAT TGCCACAAAA GGATTGGCAC TGGAAATATA ACGATTCGTA CGGTGTATTA GGCGTTTCGT TAGGTTCCGA GATAGAATTT CTGACGGCTT ATAAAGCAAA ATCATTAATT CCTGATGCCT TATCAAGCAT GGAATTTAAT ATTGCGCACG CCAAATTCTA TATGAGCTTG CTCGACAAGT TGCCGAAAAC CTTATCCCTT ACCGATGCCG CCATAGTGCA AATCGCCTTA AATGCGACAG CCGCGCATTT TATGCTGACA CCGCAAATGC CTAAATCATG GTTTTTTGAT TGCAGCGATG TATGCGTATT TAGCGATGTG GGTAAAGTCT TTGAGCTTAA ATGCCAAAAA CAACGGGCTT TAGTCTTAGT CATCGAAAAC ACCCTACAAT CCGCGTTGGT GATGTTATTA TCGCCAGAAT GTGTGTTATC AGGCGCTAAA ACCATGACGC AATTTGAAAC TATTAAGGTG ATGCACAATC GCTTGCACCC ATTAAGGGTA CAGCGCCATG TCGTCGCAGC CTAA
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Protein sequence | MLLLPQKDWH WKYNDSYGVL GVSLGSEIEF LTAYKAKSLI PDALSSMEFN IAHAKFYMSL LDKLPKTLSL TDAAIVQIAL NATAAHFMLT PQMPKSWFFD CSDVCVFSDV GKVFELKCQK QRALVLVIEN TLQSALVMLL SPECVLSGAK TMTQFETIKV MHNRLHPLRV QRHVVAA
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