| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1659 |
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| Symbol | |
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| ID | 4252235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1959734 |
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| End bp | 1960543 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118271 |
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| Product | aminodeoxychorismate lyase apoprotein |
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| Protein accession | YP_733792 |
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| Protein GI | 113969999 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0501758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTTGGG TTAATGGGGT ATCACAGGCA AGCATTGCTC CCATGGACAG AGGGCTTGCC
TATGGTGATG GCCTATTTGC CACGATGCGA ACCGATGCGC ATGGCATTTT GTTTTTTGAG
CAGCACCAAG CCCGTCTTAC GGCAGGCGCT GCGCGGCTAG GGTTTGACTG GCAAATGAGT
CAAGCCCTAA GCCAACAACT CGATACTCTC GCCAAGCAAT ACCCACAGCA CTGTATTAAA
TTGATGCTCA CACGGGGCGT GGGTGGCCGT GGCTATGCGC CGCCGGAGCT GGTTCAAGTC
ACTGAAGTCG TCTCAGTTCA TCCTATTCCT GCCCAATATG CCGTGTGGCA GCAACAGGGC
ATTCGCCTTG CGACGTCAGC GGTCCAATTA GGTCATCAAC CCTTATTGGC GGGCATAAAG
CACCTTAATC GCCTCGAGCA AGTGTTGATC AAATCCCAGC CCTTACCACA GGGGGTTGAT
GATTGGTTGG TGCTGGATTG CATTGGGCAG GTGATAGAGT CTTCGATGGC GAATATCTTT
TTTGTCAAAG GTAATCAAGT GATTACCCCA TCGTTGGAAC GCTGCGGCGT CGCGGGTGTG
ATGCGCGAGC AAGTTATGTT AGCCTTACTT GCACAGCAGA TGAATATCGA TTGTTTGCCG
TTTGGCGCCG AGCGTTTAGT GGAGTTTGAC TCGGCATTTA TCACTAACAG CGTCTTAGGC
GTAGTGGATG TGCTGGCGAT TGACTCGCAC ACTTTTACTC CTTCTCCTTT GACTGCAGAT
CTTAGACAAA CACTTTCACT CTCACTATGA
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| Protein sequence | MIWVNGVSQA SIAPMDRGLA YGDGLFATMR TDAHGILFFE QHQARLTAGA ARLGFDWQMS
QALSQQLDTL AKQYPQHCIK LMLTRGVGGR GYAPPELVQV TEVVSVHPIP AQYAVWQQQG
IRLATSAVQL GHQPLLAGIK HLNRLEQVLI KSQPLPQGVD DWLVLDCIGQ VIESSMANIF
FVKGNQVITP SLERCGVAGV MREQVMLALL AQQMNIDCLP FGAERLVEFD SAFITNSVLG
VVDVLAIDSH TFTPSPLTAD LRQTLSLSL
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