Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1587 |
Symbol | cysB |
ID | 4252164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1877092 |
End bp | 1878066 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118200 |
Product | transcriptional regulator CysB |
Protein accession | YP_733721 |
Protein GI | 113969928 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.296126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.104148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC AACAGCTCAG GTATATTGCT GAGGTCGTCA AACACAACCT TAACGTATCG GCCACAGCGG AAAATTTATA TACATCGCAA CCTGGGATCA GTAAGCAAGT TCGCATGTTG GAAGATGAAT TAGGTATTCA AATCTTCGGT CGCAGCGGTA AACATTTGAC CCATGTGACA CCTGCTGGCC AACAGGTGAT TAACATTGCC AATGACATCT TAGGCAAAGT CGAAAGCATT AAAAAAGTAT CTGAAGAATA CACTAAACCT GATCAAGGCG AGCTGAATAT TGCGACGACG GATACACAAG CGCGGTATGC GTTACCCCAT ATCATTCGTC AATTCATCGA CCGTTATCCC AAAGTCAATT TACATATGCA TCAAGGCACG CCATCGCAGA TCAGCGAGCA AGCGGCCCGC GGAGATGCTG ACTTTGCGAT TGCCACCGAA GCGATGCACT TGTATTCCGA CTTAATCATG TTGCCTTGTT ACCATTGGAA TCGTTCGGTT GTGGTTCCCA AAGATCATCC ATTGGCGACC CGTACCCATA TCAGTATCGA AGATTTAGCC CGTTTCCCAT TAGTCACTTA TGTGTTTGGA TTCGATCGCG CCTCGGAGAT TGAAAAAGCC TTTAACCGGG CCAACCTCGA GCCGCGGGTG GTCTTTAGTG CGACCAGCGC CGATGTGCTG AAAACCTATG TACGTTTAGG CTTAGGGGTT GGGGTGATTG CCTCGATGGC GATTGATCCT AATATCGATA AGGACCTCGT CGCTATCGAT GCAGGCCATC TATTTGCCCA CAGTACCACT AAGATTGGTT TTAGGAAGGG CAGTTTCTTA CGTAGCTATA TGTATGACTT TATTCAGCAC TTTGCACCGC ATTTGACTCG CGATGTCGTT GAAAAGGCCG TGGCATTACG CGATCAGCAA TTAATCGATG AAATGTTTGC CGATAAAAAT CTGCCAATGC GTTGA
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Protein sequence | MKLQQLRYIA EVVKHNLNVS ATAENLYTSQ PGISKQVRML EDELGIQIFG RSGKHLTHVT PAGQQVINIA NDILGKVESI KKVSEEYTKP DQGELNIATT DTQARYALPH IIRQFIDRYP KVNLHMHQGT PSQISEQAAR GDADFAIATE AMHLYSDLIM LPCYHWNRSV VVPKDHPLAT RTHISIEDLA RFPLVTYVFG FDRASEIEKA FNRANLEPRV VFSATSADVL KTYVRLGLGV GVIASMAIDP NIDKDLVAID AGHLFAHSTT KIGFRKGSFL RSYMYDFIQH FAPHLTRDVV EKAVALRDQQ LIDEMFADKN LPMR
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