Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1531 |
Symbol | |
ID | 4252109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1806264 |
End bp | 1807328 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118135 |
Product | hypothetical protein |
Protein accession | YP_733666 |
Protein GI | 113969873 |
COG category | [S] Function unknown |
COG ID | [COG4984] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCCATC TTACCTCGCA CGTCTATGAA TGGCTGGAAC AGGGACATAT CACGCCAACC GAGGCAAACG AACTCTATCG ACAGTTATCC GTGCCACCCA ACGCCGCCAG TTGGCGCAGC TTATTAGCGC AGCTTTTACA ATGGGCGGGG GCGTTAAGTT TTGCCTGCGG GGTGATTTTC TTTTTTGCCT ATAACTGGCA GTCGCTCGAG CGAATGAGCA AGTTTGCGCT GATTGAAGCG GCGCTATTAA TTAGCCTTGT CAGCTTTGTC TGGCTGTATT ATCGCAGCGC AGCGAAGCAG CTCGTTGACC CATCTCATTG TTTGTTCGGA GCAACCCTTG CCAATGCTGC GCTGCTGGTG GTGAGCATGT TAGTGGGTGG GCTGCTCGCG CTAGTTGGGC AAACTTATCA AACTGGCGCC GATCCTTGGC AGCTGTTCGC CATTTGGGCG CTTGCGATTT TGCCCTTCGC GTGGGTGGCA GGCTTTGATG GCCTATGGTT ACTGCTGGTG GGGCTAGTTA ATTTAAGCCT TGGGCTGTAT GCCGATACGA CTTTGCTCTG GCTGGATGAA CAGTTGTGGT TATGTTTCTT TGTGGTCCTT AATCTGACTA TCTACTACGG TTTTGTGTTT CTCAGCAGTA CCAGCAGACG TTGGTATGCG CCATTTGTAG AGTATGCGAG TTCATTGACG GCCATGGGGT GCTTTACCTT ACTAGTGTGT TGGATGATTT TTGAGCCGAG CGACACTAAG CCGCTGCTGG TTGCGGTGTG GGTTGGTTAT TTTGGCCATC TATTGTTTGG ATTCTGGTGG TTCAGGCACA AACGATTGCA GGTTTATCCC TTGGCATTGG GTGGCTTTAG TTTGATCAGC GTCGGCGCGG CGTTATTCAC CGAACTGCTG TTTCGCAATA GCGATCCCAT TGGCGGCTTT TTGTTGATAG GGCTTTACAT CATTTTAGCG AGCACAGGCT TAAGCACTGT GTTAAGGCGA TTGCATCAGC AAGCTAAAGC GGGCATCTCG CCTACGCAGA CTCCCAGTGA GAATGAGGCG CTAAGCCATG AATAA
|
Protein sequence | MRHLTSHVYE WLEQGHITPT EANELYRQLS VPPNAASWRS LLAQLLQWAG ALSFACGVIF FFAYNWQSLE RMSKFALIEA ALLISLVSFV WLYYRSAAKQ LVDPSHCLFG ATLANAALLV VSMLVGGLLA LVGQTYQTGA DPWQLFAIWA LAILPFAWVA GFDGLWLLLV GLVNLSLGLY ADTTLLWLDE QLWLCFFVVL NLTIYYGFVF LSSTSRRWYA PFVEYASSLT AMGCFTLLVC WMIFEPSDTK PLLVAVWVGY FGHLLFGFWW FRHKRLQVYP LALGGFSLIS VGAALFTELL FRNSDPIGGF LLIGLYIILA STGLSTVLRR LHQQAKAGIS PTQTPSENEA LSHE
|
| |