Gene Shewmr4_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1531 
Symbol 
ID4252109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1806264 
End bp1807328 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content51% 
IMG OID638118135 
Producthypothetical protein 
Protein accessionYP_733666 
Protein GI113969873 
COG category[S] Function unknown 
COG ID[COG4984] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCATC TTACCTCGCA CGTCTATGAA TGGCTGGAAC AGGGACATAT CACGCCAACC 
GAGGCAAACG AACTCTATCG ACAGTTATCC GTGCCACCCA ACGCCGCCAG TTGGCGCAGC
TTATTAGCGC AGCTTTTACA ATGGGCGGGG GCGTTAAGTT TTGCCTGCGG GGTGATTTTC
TTTTTTGCCT ATAACTGGCA GTCGCTCGAG CGAATGAGCA AGTTTGCGCT GATTGAAGCG
GCGCTATTAA TTAGCCTTGT CAGCTTTGTC TGGCTGTATT ATCGCAGCGC AGCGAAGCAG
CTCGTTGACC CATCTCATTG TTTGTTCGGA GCAACCCTTG CCAATGCTGC GCTGCTGGTG
GTGAGCATGT TAGTGGGTGG GCTGCTCGCG CTAGTTGGGC AAACTTATCA AACTGGCGCC
GATCCTTGGC AGCTGTTCGC CATTTGGGCG CTTGCGATTT TGCCCTTCGC GTGGGTGGCA
GGCTTTGATG GCCTATGGTT ACTGCTGGTG GGGCTAGTTA ATTTAAGCCT TGGGCTGTAT
GCCGATACGA CTTTGCTCTG GCTGGATGAA CAGTTGTGGT TATGTTTCTT TGTGGTCCTT
AATCTGACTA TCTACTACGG TTTTGTGTTT CTCAGCAGTA CCAGCAGACG TTGGTATGCG
CCATTTGTAG AGTATGCGAG TTCATTGACG GCCATGGGGT GCTTTACCTT ACTAGTGTGT
TGGATGATTT TTGAGCCGAG CGACACTAAG CCGCTGCTGG TTGCGGTGTG GGTTGGTTAT
TTTGGCCATC TATTGTTTGG ATTCTGGTGG TTCAGGCACA AACGATTGCA GGTTTATCCC
TTGGCATTGG GTGGCTTTAG TTTGATCAGC GTCGGCGCGG CGTTATTCAC CGAACTGCTG
TTTCGCAATA GCGATCCCAT TGGCGGCTTT TTGTTGATAG GGCTTTACAT CATTTTAGCG
AGCACAGGCT TAAGCACTGT GTTAAGGCGA TTGCATCAGC AAGCTAAAGC GGGCATCTCG
CCTACGCAGA CTCCCAGTGA GAATGAGGCG CTAAGCCATG AATAA
 
Protein sequence
MRHLTSHVYE WLEQGHITPT EANELYRQLS VPPNAASWRS LLAQLLQWAG ALSFACGVIF 
FFAYNWQSLE RMSKFALIEA ALLISLVSFV WLYYRSAAKQ LVDPSHCLFG ATLANAALLV
VSMLVGGLLA LVGQTYQTGA DPWQLFAIWA LAILPFAWVA GFDGLWLLLV GLVNLSLGLY
ADTTLLWLDE QLWLCFFVVL NLTIYYGFVF LSSTSRRWYA PFVEYASSLT AMGCFTLLVC
WMIFEPSDTK PLLVAVWVGY FGHLLFGFWW FRHKRLQVYP LALGGFSLIS VGAALFTELL
FRNSDPIGGF LLIGLYIILA STGLSTVLRR LHQQAKAGIS PTQTPSENEA LSHE