| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1514 |
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| Symbol | |
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| ID | 4252092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1780354 |
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| End bp | 1782090 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118113 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_733649 |
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| Protein GI | 113969856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0136717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGTAC AAGGATTAAC TTATCTGATT GTGGGGCTGT CGTTCGCGCT CTACATTGGG
ATCGCGATTT GGTCCCGTGC GGGCTCGACT AAAGAGTTCT ATGTAGCGGG TGGCGGTGTT
CACCCCGTTG TGAACGGTAT GGCAACGGCA GCCGACTGGA TGTCAGCGGC ATCCTTTATT
TCGTTAGCGG GTATTGTTTC TTTCGTCGGT TATGACGGCA GTGTGTACCT GATGGGCTGG
ACAGGCGGTT ACGTTCTATT AGCCCTGTGT ATGGCACCAT ACTTACGTAA ATTTGGTAAG
TTTACCGTGC CTGATTTCGT GGGTGAACGT TATTACTCCC AAGCGGCGCG TACGGTAGCG
GTTATTTGCG CTATCTTCAT CTGCTTTACG TATATTGCAG GTCAGATGCG CGGTGTGGGC
GTAGTATTCT CTCGCTTCCT CGAAGTTGAG GTGGATACTG GCGTGTACAT CGGTATGGCC
GTGGTGTTCT TCTATGCGGT ACTCGGTGGT ATGAAGGGTA TTACCTATAC TCAGGTGGCC
CAGTACTGCG TGCTGATCTT CGCCTTTATG GTGCCTGCAA TCTTCCTATC TGTGATGATG
ACGGGTCATA TCATTCCTCA AATTGGTTTC GGTGCTCAGT TAATCGATGC TGCTGGTAAT
AACTCTGGCG TCTATCTGTT AGAGAAACTC AACAATCTAT CGGTAGATTT AGGCTTTGCG
CCATACACCG ATGGCTCTAA GAGCATGATC GACGTGTTCT GTATTACCGG CGCTCTGATG
GTTGGTACCG CAGGTTTACC CCATGTTATT GTGCGTTTCT TCACTGTACC TAAAGTGAAA
GATGCGCGTA TCTCTGCTGG CTGGGCACTG GTGTTTATCG CCATCATGTA CACCACTGTA
CCTGCATTAG CGGCCTTCTC CCGTGTAAAT ATGATTGAGA CCATTAACGG TCCAGATCAA
AAGGGTGTTG CCTATGAAAC TGCGCCTGAT TGGATCAAAA ACTGGGAAAA AACTGGCCTG
ATCAAATGGG ATGACAAGAA TGGCGACGGC AAAATCTATT ACGCAAAAGG CAAAATGGAA
GATGCTGCTA GCCCTAACGA AATGAAGATC GACAACGATA TCATCGTATT AGCAACGCCA
GAAATCGCTA ATCTGCCAGC TTGGGTTATC GCGCTGGTGG CTGCGGGTGG TCTTGCTGCG
GCACTATCAA CCTCTGCGGG TCTGTTGTTG GTTATCTCTA CTTCAGTATC ACATGACTTA
CTGAAGAAGA ACCTGATGCC GAATATCTCT GACAAGAAAG AGTTAATGTA CGCTCGACTT
GCTGCTGGTA TCGGTATTGT GATTGCCGGT TACTTCGGGG TTAACCCTCC AGGATTCGTA
GCAGCTGTGG TGGCATTCGC CTTCGGTCTG GCAGCGTCAT CTCTGTTCCC TGCGATTATC
ATGGGTATCT TCTCTAAGAC CATGAACAAA GAAGGTGCTA TTGCAGGTAT GGTAATAGGT
TTACTGTTCA CTGCGGGTTA TATCATCTAC TTCAAGTTTG TGAACCCAAC GGCCAACGTA
TCGGCGAACT GGTTCCTCGG TATTTCGCCA GAAGGTATCG GTATGGTGGG TATGCTAGTG
AACTTTGCGG TTGCGGCTAT TGTCTGCAAA CTGACCGCAG CGGCACCAGC CCATGTACAG
GATATGGTTG AGTCTATCCG TTTCCCTAAA GGGGCGGGTG AGGCCAGCGG CCACTAA
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| Protein sequence | MGVQGLTYLI VGLSFALYIG IAIWSRAGST KEFYVAGGGV HPVVNGMATA ADWMSAASFI
SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFVGER YYSQAARTVA
VICAIFICFT YIAGQMRGVG VVFSRFLEVE VDTGVYIGMA VVFFYAVLGG MKGITYTQVA
QYCVLIFAFM VPAIFLSVMM TGHIIPQIGF GAQLIDAAGN NSGVYLLEKL NNLSVDLGFA
PYTDGSKSMI DVFCITGALM VGTAGLPHVI VRFFTVPKVK DARISAGWAL VFIAIMYTTV
PALAAFSRVN MIETINGPDQ KGVAYETAPD WIKNWEKTGL IKWDDKNGDG KIYYAKGKME
DAASPNEMKI DNDIIVLATP EIANLPAWVI ALVAAGGLAA ALSTSAGLLL VISTSVSHDL
LKKNLMPNIS DKKELMYARL AAGIGIVIAG YFGVNPPGFV AAVVAFAFGL AASSLFPAII
MGIFSKTMNK EGAIAGMVIG LLFTAGYIIY FKFVNPTANV SANWFLGISP EGIGMVGMLV
NFAVAAIVCK LTAAAPAHVQ DMVESIRFPK GAGEASGH
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