Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1470 |
Symbol | |
ID | 4252048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1720149 |
End bp | 1721165 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118069 |
Product | putative periplasmic protease |
Protein accession | YP_733605 |
Protein GI | 113969812 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000101356 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAATTTC TATACGAATA TGGCATGTTT TTAGCGAAAG CTGTGACAAT TGTGGTTGCG CTTGTTGCTG TGATTATTGT GGTGCTCGCG TCCACGGTGA AGCACAAATC GGATAAAGGT GAACTGAGGA TCACCAATCT TTCAGAAGAA CTGGAAGATC TCAAACACAG CTTGAAGGAA GAACTGCTGT CGAAGAAGCA GTTTAAAGCC TACGAAAAAC AGCTGAAAGC GGACGAAAAG GCGAAGGAAA AAGCGGCCGA AGAAGACAGC AAAGGTAAAG TTTTTGTAAT TGATTTTAAA GGCAGTATTG ATGCCGCCGA AGTGGCTTCT TTGCGGGAAG AAATCAGCGC GATTTTAACC ATTGCCGAAA AGGGCGACGA AGTGGTGGTG AATGTCGAAA GTGGCGGTGG CATGGTCCAT GGCTACGGTC TGGCCTCTAG CCAGCTTGAC CGTCTGCGTC AGGCCGAGAT CCCATTAACG ATTTGCGTGG ATAAAGTTGC CGCCAGCGGT GGTTATATGA TGGCCTGTGT GGCAAACAAA GTGTATGCCG CGCCATTCGC CATCGTAGGT TCAATCGGTG TCGTTGCCCA GTTGCCTAAC TTCAACCGTT TATTGAAGAA ACATGAAATC GACTACGAGC AACACACTGC CGGTGATTTT AAGCGCACCT TAACCGTGTT TGGCGAAAAT ACGGACGAAG GCAGACAGAA GTTCCAACAG GAGCTGGAAG AAACCCACGT GTTGTTTAAA GCTTTCGTGA GCAAGTATCG TCCTCAACTC GACTTGGCTA AGGTGGCCAC AGGCGAACAT TGGTACGGTC AACAGGCGAT TGAATTAGGC CTTATTGATG CGATTTCAAC CAGTGACGAT GTGTTAATGC AGTTAGCTGG CGAACGTACT GTGTACAAGT TGCGCTACCA AGTCCGTAAG AAACTGGCAG ATAAAATCGC CCATGGTGCG TCTTTATCGG TAAATGCGAT TTTTAATCGA TTAGTTGAGA AAAATCGTTC CATGTAA
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Protein sequence | MEFLYEYGMF LAKAVTIVVA LVAVIIVVLA STVKHKSDKG ELRITNLSEE LEDLKHSLKE ELLSKKQFKA YEKQLKADEK AKEKAAEEDS KGKVFVIDFK GSIDAAEVAS LREEISAILT IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQAEIPLT ICVDKVAASG GYMMACVANK VYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGDF KRTLTVFGEN TDEGRQKFQQ ELEETHVLFK AFVSKYRPQL DLAKVATGEH WYGQQAIELG LIDAISTSDD VLMQLAGERT VYKLRYQVRK KLADKIAHGA SLSVNAIFNR LVEKNRSM
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