| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1470 |
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| Symbol | |
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| ID | 4252048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1720149 |
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| End bp | 1721165 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118069 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_733605 |
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| Protein GI | 113969812 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000101356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAATTTC TATACGAATA TGGCATGTTT TTAGCGAAAG CTGTGACAAT TGTGGTTGCG
CTTGTTGCTG TGATTATTGT GGTGCTCGCG TCCACGGTGA AGCACAAATC GGATAAAGGT
GAACTGAGGA TCACCAATCT TTCAGAAGAA CTGGAAGATC TCAAACACAG CTTGAAGGAA
GAACTGCTGT CGAAGAAGCA GTTTAAAGCC TACGAAAAAC AGCTGAAAGC GGACGAAAAG
GCGAAGGAAA AAGCGGCCGA AGAAGACAGC AAAGGTAAAG TTTTTGTAAT TGATTTTAAA
GGCAGTATTG ATGCCGCCGA AGTGGCTTCT TTGCGGGAAG AAATCAGCGC GATTTTAACC
ATTGCCGAAA AGGGCGACGA AGTGGTGGTG AATGTCGAAA GTGGCGGTGG CATGGTCCAT
GGCTACGGTC TGGCCTCTAG CCAGCTTGAC CGTCTGCGTC AGGCCGAGAT CCCATTAACG
ATTTGCGTGG ATAAAGTTGC CGCCAGCGGT GGTTATATGA TGGCCTGTGT GGCAAACAAA
GTGTATGCCG CGCCATTCGC CATCGTAGGT TCAATCGGTG TCGTTGCCCA GTTGCCTAAC
TTCAACCGTT TATTGAAGAA ACATGAAATC GACTACGAGC AACACACTGC CGGTGATTTT
AAGCGCACCT TAACCGTGTT TGGCGAAAAT ACGGACGAAG GCAGACAGAA GTTCCAACAG
GAGCTGGAAG AAACCCACGT GTTGTTTAAA GCTTTCGTGA GCAAGTATCG TCCTCAACTC
GACTTGGCTA AGGTGGCCAC AGGCGAACAT TGGTACGGTC AACAGGCGAT TGAATTAGGC
CTTATTGATG CGATTTCAAC CAGTGACGAT GTGTTAATGC AGTTAGCTGG CGAACGTACT
GTGTACAAGT TGCGCTACCA AGTCCGTAAG AAACTGGCAG ATAAAATCGC CCATGGTGCG
TCTTTATCGG TAAATGCGAT TTTTAATCGA TTAGTTGAGA AAAATCGTTC CATGTAA
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| Protein sequence | MEFLYEYGMF LAKAVTIVVA LVAVIIVVLA STVKHKSDKG ELRITNLSEE LEDLKHSLKE
ELLSKKQFKA YEKQLKADEK AKEKAAEEDS KGKVFVIDFK GSIDAAEVAS LREEISAILT
IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQAEIPLT ICVDKVAASG GYMMACVANK
VYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGDF KRTLTVFGEN TDEGRQKFQQ
ELEETHVLFK AFVSKYRPQL DLAKVATGEH WYGQQAIELG LIDAISTSDD VLMQLAGERT
VYKLRYQVRK KLADKIAHGA SLSVNAIFNR LVEKNRSM
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