Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1433 |
Symbol | |
ID | 4252011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1675222 |
End bp | 1677342 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118032 |
Product | DNA topoisomerase III |
Protein accession | YP_733568 |
Protein GI | 113969775 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCT ATATTGCTGA AAAACCAAGC CTAGGGCGTG CAATCGCCGA TGTGCTGCCT AAACCCCACA AAAAAGGTGA CGGGTTTATC GAAGACGCAA ACGGTAACTG TGTGTCTTGG TGTGTCGGGC ACTTGCTCGA ACAGGCTGAG CCCGATGCCT ATAATCCCGA GTTTAAATCG TGGAAGTTTG AGCATTTACC CATAGTGCCA GAGAAGTGGC AGCTTAAACC TAAGGCCGCG ACCCGCAGCC AACTCACAGT ACTTAAAAAG CTGGTGAAGC AGGCCGATAC TTTAGTGAAT GCGGGTGATC CCGACAGGGA AGGGCAGTTA TTGGTTGATG AAGTGATCGC CTATTTGGGC GTGACGGGCG ATAAATTACA GCAAACGCAG CGACTCCTTA TCAGCGACTT AAACCCGCAG GCGGTGAAAC GTGCCTTGTC ACAACTCCGC AGTAATCGTG AGTTTATTCC TTTGTCGACC TCGGCACTTG CCAGAAGCCG CGCCGATTGG CTCTATGGCA TGAATATGAC GCGGGCCTAC ACTATTCAAG GGAAAAAGGT TGGCTATCAG GGCGTACTAT CGGTCGGCCG AGTACAGACC CCGCTGCTTG GGCTTATCGT GCGCCGCGAT GAGGAAATCG CAAATTTTCA ATCTAAGCCT TTTTATGAGG TTCTGGCCCA CTTAGTGACG GACAAAGATC AGGCTTTCAC GGCGAAGTGG CAACCCAGTG AAGCCTGTTT ACCCTATATG GATGAGGAAG GGCGCGTGCT CGCTAAGGGC CTAGCACAAA ATGTGGTGCG TCGGATCACC GATAAACCCG CCAAAGTGAC CCAGTTAAGC ACTAAGGATA AGCAGCAGAA TCCGCCTTTA CCCTATAGTT TATCGGCGCT GCAAATAGAT GCCGCCAAGC GCTTCGGTAT GAGCGCCAAG GACGTGCTCG ATACCTGCCA GAGCTTATAC GAGCGCCATA AGCTAATCAC TTATCCACGC TCAGACAGTC GTTATTTGCC CACCGAGCAG CATGGGCTTG CAAGTGGGGT ATTAGCGGCC ATTACGGGCG GTGCGCCCGA GTTAGTCGCA CATGCTGAGG CGCCCAATCC TCGGCTTAAA TCTAAGGCGT GGGATGATAA AAAAGTCGAT GCTCACCACG CCATTATTCC AACGGAAAAA CAGCCCAATC TAGCTGGTTT AAGCCAGCGG GAAAGGCAGC TTTATCTGCA TATTGCTCGC CAGTATTTGG CGCAGTTTTA CCCTGCCTAT TGCTACAGTG AAACCGCGGT CGAAGTGACG ATCGAAGGTG GCCTTTTTAA AACTAAGGCA AAACAGGATA AGTCTCTCGG TTGGAAACAA CTGTTTGCCA GAGAAGAGAA CGAACGAAAG GACGCATCAT CCGCAGCGAG TTTTGCGCAA GGCGACAAGG ACACAGAGGA AGGGGAATAT CTTGGTCAGT TACCGCCTCT TACCTTAGGA CAAGTTCTTC ATTGTCACCA AGGTGAATTA GTCGAGAAGC AAACTCAACC TCCCAAAGCC TTTACCGATG CTACCTTGCT GAGTGCGATG ACGGGGATTA ACCGTTATGT GACTGACCCA GAGATCCGCA AAATTTTAAA GGAAACCGAT GGCTTAGGTA CGGAAGCGAC TCGCGCAGGC ATTATTGAAC TGCTGTTTAA ACGGGGCTTT ATTCAGCGTC AGGGCAAGTC GATTGTGGCC ACGGAGGTGG GCAAGGGCTT AATTAATAGT TTACCCCTTA GCGCCACGAC ACCCGATATG ACGGCGCTGT GGGAGGCAAG TCTAAACGGT ATCTGCCATA AAGAAATCTC ATATCAAGGC TTTATGCAAC CACTGCTGGG GACGCTAAAT AACTTAATTG AAAATGCGGG CGCTCAATTA CCCTCAGCCC TCAATGGCTT AAAAGGGCAG GGCTTTAAGC GTGCAGCAAC GAAAAAGTCC GGCTATCGAA AAGCTGGAGC CAAAGGGGCA GGATGGAAAA AATCCGGCAC TAAAAACGCG GCAGTGGGAA GCTCGGCCGC TAAAACTACC GCGGCTAAAT CGACGGTCTC GACATCCGGT ACGCCTACTA CGCCTAGACG GCGAGCGAGC AAAGCGCCCG CCCAAGCTTG A
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Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGFI EDANGNCVSW CVGHLLEQAE PDAYNPEFKS WKFEHLPIVP EKWQLKPKAA TRSQLTVLKK LVKQADTLVN AGDPDREGQL LVDEVIAYLG VTGDKLQQTQ RLLISDLNPQ AVKRALSQLR SNREFIPLST SALARSRADW LYGMNMTRAY TIQGKKVGYQ GVLSVGRVQT PLLGLIVRRD EEIANFQSKP FYEVLAHLVT DKDQAFTAKW QPSEACLPYM DEEGRVLAKG LAQNVVRRIT DKPAKVTQLS TKDKQQNPPL PYSLSALQID AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPTEQ HGLASGVLAA ITGGAPELVA HAEAPNPRLK SKAWDDKKVD AHHAIIPTEK QPNLAGLSQR ERQLYLHIAR QYLAQFYPAY CYSETAVEVT IEGGLFKTKA KQDKSLGWKQ LFAREENERK DASSAASFAQ GDKDTEEGEY LGQLPPLTLG QVLHCHQGEL VEKQTQPPKA FTDATLLSAM TGINRYVTDP EIRKILKETD GLGTEATRAG IIELLFKRGF IQRQGKSIVA TEVGKGLINS LPLSATTPDM TALWEASLNG ICHKEISYQG FMQPLLGTLN NLIENAGAQL PSALNGLKGQ GFKRAATKKS GYRKAGAKGA GWKKSGTKNA AVGSSAAKTT AAKSTVSTSG TPTTPRRRAS KAPAQA
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