Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1416 |
Symbol | |
ID | 4251994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1653138 |
End bp | 1654232 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118015 |
Product | chorismate synthase |
Protein accession | YP_733551 |
Protein GI | 113969758 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.25436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGAA ACAGTATTGG TCAAAATTTT GTGGTGACTA CCTTTGGTGA AAGTCACGGT GTGGCGCTCG GTTGTATTAT TGATGGTTGC CCTCCAGGGC TCGAACTCAC CGAAGCCGAT ATGCAGCATG ATTTAGACCG CCGTCGTCCT GGCACATCCC GTTATACCAC CGCGCGCCGT GAGCCTGATG AAGTACGGAT CTTATCCGGT GTGTTTGAAG GCAAAACCAC AGGCACCTCC ATTGGACTTC TGATCGAAAA CACCGATCAG CGCAGCCAAG ATTACTCCAA TATCAAAGAT TTATTCCGTC CAGGACACGC CGATTACACC TATCAGCAAA AGTATGGTCT GCGTGATTAC CGTGGCGGTG GCCGCTCATC GGCCCGCGAA ACCGCTATGC GGGTTGCGGC GGGTGCTGTG GCGAAAAAGT ATTTAAAACA AGTGCATGGT ATTAATATCC AAGGCTATAT GTCTCAACTT GGACCGATTA GTGCCGAGAC CCTCGATTTT AGTCAAATCG AGCAGAATGC CTTTTTCTTC CCCGATGCGA GTAAGCTCGA GGCGCTAGAT GAATATATGC GCGAGCTGAA AAAATCCGGT GATTCCATTG GTGCCAAAAT CTCTGTGGTA GCGACAGGTG TTCCCGTTGG ACTGGGCGAA CCCGTGTTCG ATAGGCTCGA TGCCGACATC GCCCATGCCT TAATGGGCAT AAACGCAGTA AAAGGCGTTG AAATTGGCGA TGGCTTTGGC GTTGTCACGC AAAAGGGCTC GGAAGGACGC GATTTAATGT CGCCACTGGG TTTTGAATCA AATCATGCCG GTGGCATACT CGGCGGCATT TCATCGGGTC AACCCATCGT CGCCCATATT GCATTAAAAC CAACCTCGAG TATCAGTGTG CCGGGCCAAA GCATGACGGC CCAAGGGGAA ATGGCGGAAG TGGTGACTAA AGGTCGTCAC GACCCCTGTG TCGGGATCCG CGCGGTACCG ATCGCCGAAG CTATGCTGGC GATTGTGTTG ATGGATCATC TGTTAAGACA CAGAGCTCAA AATCAGGATG TTTGCAGTCA CACACCGATT CTCGGCATGA GATAG
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Protein sequence | MSGNSIGQNF VVTTFGESHG VALGCIIDGC PPGLELTEAD MQHDLDRRRP GTSRYTTARR EPDEVRILSG VFEGKTTGTS IGLLIENTDQ RSQDYSNIKD LFRPGHADYT YQQKYGLRDY RGGGRSSARE TAMRVAAGAV AKKYLKQVHG INIQGYMSQL GPISAETLDF SQIEQNAFFF PDASKLEALD EYMRELKKSG DSIGAKISVV ATGVPVGLGE PVFDRLDADI AHALMGINAV KGVEIGDGFG VVTQKGSEGR DLMSPLGFES NHAGGILGGI SSGQPIVAHI ALKPTSSISV PGQSMTAQGE MAEVVTKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRAQ NQDVCSHTPI LGMR
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