Gene Shewmr4_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1374 
Symbol 
ID4251393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1602961 
End bp1603485 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID638117973 
Producthypothetical protein 
Protein accessionYP_733509 
Protein GI113969716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00822959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCTTT TCGATTTTAA GGACTTAGGT GCGGCTAAGT CTTGGTATGG CGTCAATGAT 
ACTGTGATGG GCGGCCTGTC ACGCAGTAAG CTCACCATCT CTCCGTTAGG TTATGGGATG
TTTAGTGGCC ATGTGTCGCT GGCCAATGGT GGTGGGTTTG CCTCGGTGCG CTGCGAGTTT
GCACCGCTTA ATGTCGGGGA GTTTAGTGGG ATTTACCTCG AACTCGACCG CGACAGAAGC
AAGCATTACA AAGTGAATCT TAAGGATGCC GAGACGCCGC AGAGCACGGT TTATCAAGCG
CCTATGCCCG ATGCTAAGCA TCAATCCTTT GGCGTTAACG GTGGCAGTAT TATTCACTGG
CAGCGTATTG AAATCCCTTT TACGGCGTTT CATCCCCAGT GCCGTGGTAA ACCGATTGAG
CGTGCTGCGA TAGATTTAAG CCGTTTGACT AGTATAGGGC TGGTGATTGG CGCGCAGCAA
AGTGGTGATT TTTCGTTGAA GATTAGATCG ATAGGTTGTT ATTAA
 
Protein sequence
MILFDFKDLG AAKSWYGVND TVMGGLSRSK LTISPLGYGM FSGHVSLANG GGFASVRCEF 
APLNVGEFSG IYLELDRDRS KHYKVNLKDA ETPQSTVYQA PMPDAKHQSF GVNGGSIIHW
QRIEIPFTAF HPQCRGKPIE RAAIDLSRLT SIGLVIGAQQ SGDFSLKIRS IGCY