| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1366 |
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| Symbol | |
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| ID | 4251385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1592640 |
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| End bp | 1594469 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117965 |
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| Product | ABC transporter related |
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| Protein accession | YP_733501 |
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| Protein GI | 113969708 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00434177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0240824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAC GATTTGAATC TTGGGTTGAA GCCCTACCCG ATGGTGAACC AACCAAACCT
CCCACCGGGG TGTATGCGTT CTGCCGGCAT TACACTAAGG GCTATGAATT ACCGCTTATC
TTAATGTCAG TACTGACGGC ATTAATCGCC ATGCTCGAAG TCTCGCTATT TGGCTTTATG
GGGCAATTAG TCGATTGGTT AGTGAAAAAA AGCCCTGAGA CACTCTTTCA AGATGAAGGC
TCGACGCTGC TATTAATGGG GCTGATGGTC CTAGTGGTGA TGCCGATATT AGTGCTATTC
CATGCGCTTA TCATGCATCA AACCTTGCTG GGTAATTATC CGATGTCGAT TCGCTGGCTT
GCACACCGCT ATCTGCTCAA GCAAAGCGTC TCTTTCTATC AAAATGATTT TGCCGGCCGT
ATTGCCACTA AAGTAATGCA AACCTCCCTT GCGGTCCGTG AAACCGTGAT GAAACTCCTC
GATGTGCTGG TATACATTTT AGTGTATTTC ACCTCCATGC TGGTGATGGT GGCCAGTGCC
GATGTGCGTC TGGTGATCCC CATGCTGATC TGGCTGGCGC TCTATATCGG TTTACAGTGG
TATTTTGTGC CTAGGCTGAA AACGGTTTCA ACCGAACAGG CCGATGCACG CTCGACAATG
ACGGGCCGTA TTGTCGACAG TTACACCAAT ATCACCACGG TGAAACTCTT CGCCCATACG
GATAAAGAGG CCGAGTATGC CAAGGCGAGT ATGCGCAGTT TCCTCGACAC TGTGTACCGC
CAGATGCGCC TCGTCACGGG GATCAGTGTC AGTGTGCAAG TGATTAACTA TATGCTCGCC
TTCAGCATTG CCGCAGTATC TATCTTGCTC TGGAGTGACA ATGCCATCTC TGTTGGAGCG
ATCGCAATTG CCGTGAGTTT AGCGCTACGC CTCAATGGTA TGTCGCAGTG GATCATGTGG
GAAATCAGTT CATTATTTGA AAACATCGGT ACAGTGACCG ATGGGATGAA TACCCTTTCG
AAAACGACAC TGATCCAAGA TTCGCCCAAT GCCAACACTT TAGTGGTAGA GCAAGGACGT
ATCGATTTTA ATCAGGTGAG CTTCCATTAC GGCGAAGAAA CCGGTGTTAT CGAAGATCTT
AACCTCAATA TCAAAGCGGG CGAAAAAGTC GGTCTCGTTG GCCGCTCGGG CGCGGGCAAG
TCAACCCTAG TGAACTTGTT GATGCGTTTT TACGATGTTG AGAAAGGTCA AATTTGTATC
GATGGTCAAG ATATTAAAGC GGTCAAGCAG GACTCACTGC GTTCACAGAT TGGCATGGTG
ACCCAAGATA CTTCTCTGCT TCATCGCACG ATTCGGGAGA ATATTCTTTA CGGTAATCCT
GATGCCAGCG AAACCCAACT CGAACATGCA ATAAAACAGG CTCAGGCCCA TGATTTTATT
AATGAACTGA CCGACCCTAA TGGCAACCAT GGCTTAGATG CACAAGTCGG TGAGCGAGGG
GTTAAGCTCT CAGGTGGACA GAGACAGCGT ATCGCGATTG CTCGGGTACT ATTGAAAAAT
GCGCCGATTT TACTGCTCGA TGAGGCGACT TCTGCCTTGG ACTCCGAAGT GGAAGCTGCG
ATTCAGGAAA GCTTGTACGA ATTGATGCAA GGAAAGACGG TGATCGCGAT TGCCCATAGA
TTATCCACTA TCGCGGCGAT GGACAGATTA ATCGTGCTCG ATCAAGGTCG TATCGTCGAG
CAAGGAACCC ATCAAGAGTT GATTGCCGCT GGCGGTATCT ATGCCCAGCT TTGGGCCCAT
CAAACGGGTG GTTTCCTCGG GGTTGAGTAG
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| Protein sequence | MFKRFESWVE ALPDGEPTKP PTGVYAFCRH YTKGYELPLI LMSVLTALIA MLEVSLFGFM
GQLVDWLVKK SPETLFQDEG STLLLMGLMV LVVMPILVLF HALIMHQTLL GNYPMSIRWL
AHRYLLKQSV SFYQNDFAGR IATKVMQTSL AVRETVMKLL DVLVYILVYF TSMLVMVASA
DVRLVIPMLI WLALYIGLQW YFVPRLKTVS TEQADARSTM TGRIVDSYTN ITTVKLFAHT
DKEAEYAKAS MRSFLDTVYR QMRLVTGISV SVQVINYMLA FSIAAVSILL WSDNAISVGA
IAIAVSLALR LNGMSQWIMW EISSLFENIG TVTDGMNTLS KTTLIQDSPN ANTLVVEQGR
IDFNQVSFHY GEETGVIEDL NLNIKAGEKV GLVGRSGAGK STLVNLLMRF YDVEKGQICI
DGQDIKAVKQ DSLRSQIGMV TQDTSLLHRT IRENILYGNP DASETQLEHA IKQAQAHDFI
NELTDPNGNH GLDAQVGERG VKLSGGQRQR IAIARVLLKN APILLLDEAT SALDSEVEAA
IQESLYELMQ GKTVIAIAHR LSTIAAMDRL IVLDQGRIVE QGTHQELIAA GGIYAQLWAH
QTGGFLGVE
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