| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1358 |
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| Symbol | |
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| ID | 4251377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1577283 |
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| End bp | 1580354 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117942 |
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| Product | hypothetical protein |
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| Protein accession | YP_733493 |
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| Protein GI | 113969700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.831735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.146339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTAATT CTACGCAAGA AATGCAATTC GAAAATTATC GTCCTCGTCC GCCACAACCC
GAACCTAAGG CTAAGCGTCA GCGCAAGCCG AGATCTAAGG GGCGTGTCTG GTTCCTGTTT
TTTATTCTGA TTATCTGTGT GGCGATTTTG GTTGGTCAGG AGGTTAAAAC CTCTTATTTC
CAGTCTAAGT ATGTTCATCA ATATGCGAAG ACCTTGACCT ATGAGCTAAA AAATCAGCCC
AGTCAGTCAA TCATCTATCC AAGCTACGGT CCCTTCGATG AACGTCATGG CTACAGTAAG
TTGCCCCAGT ACATCGATAG ATTGCTACAG CGTAATTTCC AGGTGACGCA GCAAGTGGAG
TTTTCCCCTG CGCTACAGGA ATACGCCCAG ATGGGATTTT TCCCACCCTA TCATGAGAAG
GCACAATCGG GTTTAACGCT GCTTGATTGC CGCAATACCG ATCTGTACGA GTTTACCTAT
CCCAAACGCG TGTATCAGGA TGACGATAAA ATCCCCAATG AAATCGTCAA TACCTTGCTG
TTTATTGAAA ACCGCGAGCT GTGGACGACT GAGCCTAAGC TTAACCCGGT GATCGACTGG
CCACGCTTTA TTGTGGCGGG GATGAGCCAA ATCGCTGAAA TGGTGGGGAT GAATGTCTCT
ACCGCAGGTG GCAGTACGCT GGCGACACAA ATTGAGAAGT TCCGCCATTC CTCCCAAGGG
TTAACCCTAA GCATCAAGGA TAAGTTGCTG CAAATTGGCT CTGCCACAGT GCGGGTTTAT
CAGCAGGGTG AAATAACTGA GCCTGCCCGT AAGCGCATTA TTCAAGACTA TTTAAACACT
GTGCCTTTAT CCTCCGCGCC TAACCATGGC GAAGTACATG GTATTGGTGA TGGCCTATGG
GCCTGGTTTG GTACGGATTT CGACACGGCG AACCAACTGT TAACTTCGCC GCAAATCAAA
GCCAATGCCG CTAAGCGTGG CCAAGTGTTC CGCCAAGTGG TGGCCTTGAT GATTGCCCAG
CGCCGTCCTT CCTATTATCT GCTGCAGGGG CATGAGGATT TAGAAAATCT GGTCGATAGC
CACATCCGCC TGCTCGGTCA ATATTATCTG ATTGACCGTA AATTGAGGGA TGCGGCGCTT
GAACAAAAAT TGCAGTTTAA AGTCGCCAAA CCTCAGCGTA ATACGCAATC GGGGTCCGAT
AAGGGCGTTA ACACTATCCG TATTCGTACC GCGGGCATGT TAAATGTGGG TCTGTATGAT
TTAGACCGTC TCGACTTAAC CGTGAATAGC AGTCTACACA GTGATTTGCA GCAACAGGTG
AGTCATTACT TACGCAGTCT CGGGCAAGTC TCCACCGCCG AGAAGGTTGG CCTCTTGGGT
GAGCGTTTAC TCGAACCAAG TCAACTACAA AACGTGCTCT ACAGCTTTAC CCTCTATGAA
AAAACCGAGA CGGCTAACCG TGTGCGGGTA CAAACCGATA GTACCGATCA ACCTTTCGAT
ATTAACGAGG GCAGTAAGTT AGAGCTGGGG TCGACGGCAA AACTTAGAGT GCTGGCGACT
TACCTTGAGA TCATTGCTGA AATCCACGAT AAATATTCGA AGAAACACGG TATTGAGTTG
GAGTCGATTG AGATTGAACC TCGCGATCAT CTCACTCGCT GGGCCATCGA CTATTTGATT
GTGAACCCAG ATAGACGCCT CGACCGTATG CTGGATGCGG CGCTGCAACG GGAATACTCT
GCCTCGCCCA ATGAGCAATT CTTCACGGGT GGTGGTTTGC ATGTGTTTAA TAACTTTAAA
AAGACAGAAG ATTTTAAAGT GCCAACCATG TACGAGGCGT TGCAAAACTC CATCAACTTA
CCCTTCGTAC GTTTGATGCG TGACATAGTT AACTACAGCA GCAGTATGCA AAACGAAGGC
AATATGGCGC GCCTGCTGCG TAATGATAAA GATCCTCGCC GCGAGGAATA TCTGCGGGTG
TTTGCCGACC GCGAAGGCAA TACCTTCGTG AATAAGTTCT ACCGTAAGTA TAAAAAAGTC
GCACCCAATG AGCGTTTAGC GCTGTTTTTT GATGGCCAAA CCCAGGCGGA GCAGCAACTG
ACCGCGGCTT ACCGTTATTT GCAGCCCTAT GAGTCTATCG CTTCGTTTAA GGCCTTCTTG
CAGCAGCGTT TGCCGCAAAA CAATTACACG GATAAGCGGA TCAAAGAGCT GTATAACAAG
TACGGCCCTG AAAAATATAA TCTGCCCGAT CAAGGTTATA TCGCACGGGT GCACCCACTC
GAACTCTGGG TACTCGATTA CTTGAATCAA CATCCCGAGG CCAACCTCAA TGATGTGAAA
GAGGCGAGTA AGGATGAGCG TCAGGAAGTG TATCGCTGGC TGTTCAGAAC GCGGCATAAA
AACGCGCGTG ATGTGCGGGT ACAGGTAATG CTTGAGGTGG AGGCCTTCCT CGACATTCAT
CAGCGTTGGG CGCGTTTAGG CTATCCTTTT GAATCTATGG TGCCTTCCTT AGGTTCGGCA
CTGGGTAGCT CGGGCGACAG ACCCGCGGCG CTGGCGGAAT TGATGGGGAT TATCCAAAAC
GATGGTTATC GTTTACCAAC GGTGCGGATT AATCAGCTCC ACTTTGCCGA AGATACGCCT
TATGAGGTTC TGCTCGAAAA CCAAAATACT CAAGGTGAAC GAGTAATGCG TCATGAAGTC
GCTCAGGCGT TAAAGGCGGC GCTGGCGAAC GTCGTTCAAA ATGGTACCGC GCGCCGTCTT
AAGGGGATCT TTAGCAACGA CAACGGCGAA ATGCTGGCAA TTGGCGGTAA AACCGGTACG
GGTGACAACC GTATAGTGAC CCAGATGCAG CAGGGCCGCA AAGTGGCTAC CACGGCGATG
AACCGTACCG CGACGTTTGT GTTCTATTTA GGGGATAACT ACTTCGGCAC CTTAACCGCC
TTTGTGCCGG GCAGTAAGTC GGATGATTTT AGCTTTACCT CGGCGCTGCC ATTACAAGTG
ATGAAGGGCA TGATGCCAAT TCTTGCGCCC TATGTGAAAT CCTCGAAAGG CATGTGCGTA
CGGGATGAGT AA
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| Protein sequence | MPNSTQEMQF ENYRPRPPQP EPKAKRQRKP RSKGRVWFLF FILIICVAIL VGQEVKTSYF
QSKYVHQYAK TLTYELKNQP SQSIIYPSYG PFDERHGYSK LPQYIDRLLQ RNFQVTQQVE
FSPALQEYAQ MGFFPPYHEK AQSGLTLLDC RNTDLYEFTY PKRVYQDDDK IPNEIVNTLL
FIENRELWTT EPKLNPVIDW PRFIVAGMSQ IAEMVGMNVS TAGGSTLATQ IEKFRHSSQG
LTLSIKDKLL QIGSATVRVY QQGEITEPAR KRIIQDYLNT VPLSSAPNHG EVHGIGDGLW
AWFGTDFDTA NQLLTSPQIK ANAAKRGQVF RQVVALMIAQ RRPSYYLLQG HEDLENLVDS
HIRLLGQYYL IDRKLRDAAL EQKLQFKVAK PQRNTQSGSD KGVNTIRIRT AGMLNVGLYD
LDRLDLTVNS SLHSDLQQQV SHYLRSLGQV STAEKVGLLG ERLLEPSQLQ NVLYSFTLYE
KTETANRVRV QTDSTDQPFD INEGSKLELG STAKLRVLAT YLEIIAEIHD KYSKKHGIEL
ESIEIEPRDH LTRWAIDYLI VNPDRRLDRM LDAALQREYS ASPNEQFFTG GGLHVFNNFK
KTEDFKVPTM YEALQNSINL PFVRLMRDIV NYSSSMQNEG NMARLLRNDK DPRREEYLRV
FADREGNTFV NKFYRKYKKV APNERLALFF DGQTQAEQQL TAAYRYLQPY ESIASFKAFL
QQRLPQNNYT DKRIKELYNK YGPEKYNLPD QGYIARVHPL ELWVLDYLNQ HPEANLNDVK
EASKDERQEV YRWLFRTRHK NARDVRVQVM LEVEAFLDIH QRWARLGYPF ESMVPSLGSA
LGSSGDRPAA LAELMGIIQN DGYRLPTVRI NQLHFAEDTP YEVLLENQNT QGERVMRHEV
AQALKAALAN VVQNGTARRL KGIFSNDNGE MLAIGGKTGT GDNRIVTQMQ QGRKVATTAM
NRTATFVFYL GDNYFGTLTA FVPGSKSDDF SFTSALPLQV MKGMMPILAP YVKSSKGMCV
RDE
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