| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1354 |
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| Symbol | |
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| ID | 4251373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1569781 |
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| End bp | 1571349 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117938 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_733489 |
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| Protein GI | 113969696 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0897307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00505765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGTAG TAAGTTACGC CGATTCGGCA CTTTCTCTGC TGCCGCCTGT GGTCGCAATT
GTGTTGGCGA TTTTCACTCG CCGCGTTCTC CTTTCCCTCG GTTTAGGTAT TGTGATTGGG
GTATTATTAC TCAATCAATT TTCACCTGTG GCCAGCGGTG AGTTTTTAGT TAACAGTGTA
AAAGGACTTT TTTGGTCAGA AGATGGCGTA AATTCTTGGA ATTTATACAT TCTCGGCTTT
TTAATTGTAT TAGGGATGAT CACTGCGTTA ATTACCGTCA GTGGTAGTGC GCGGGCATTT
GCCGATTGGG CGCGCCTGCA TATTCGCAAT AAACGCGATG CCAAATTACT GACCATGTTT
TTAGGCTGTG TTGTCTTTAT TGACGATTAT TTCAATAGCT TAGTCGTTGG TTCTGTCGCA
AGACCCGTCA CCGACCGTTA TTATATTTCC CGCGCTAAGT TAGCCTATTT ATTAGATTCT
ACGGCGGCGC CGGTTTGTGT TATTTCGCCA GTATCCAGTT GGGGCGCTTA TATTATTGCG
CTGATCGGCG GCATATTAAC CGCCCATGGC TTTGCCGATT CTGGGCATTT GAGTGTATTT
ATTCAAATGA TCCCTATGAA TTTCTACGCT ATTTTTTCTT TATTATTATT ACTTTGTGTT
GCATTTATGG GCTTGGATAT TGGCCCTATG CGTGAGCATG AATTAAATGC ACAGCGCGGT
AATTTATATG ATGAGAATAA AGGATTACCA CCCGGGGCGA ATGCCGATCT ACCCGAAGCC
GAAACGGGTA AAATCCTCGG GTTATTCTTA CCTATTACCG TGCTGGTATT TGCGACCCTG
TATTTTATGA TCGATAGTGG TGCTCAGGTA TTAGCGAAAG AAGGCATTGA ATTTAATATT
ATTTCCGCTT TTGAGAAAAC CGATGTCAGT TCATCACTGT TCTTTGGTGC CCTGATTGGT
TTAGCGGTTG CACTGGTGCT TAACCTAGTG CAAGGCGTTG AAAAGTCGAT GGTTGTTAAA
GGTATAGTGC AGGGCGCTCG CTCTATGCTG CCTGCGATTT ATATCCTGTT ATTTGCATGG
ACTATTGCTG GTGTGATTGG CCAGCTTGAA ACTGGTAAGT TTATGGCAAG CCTCGCCACA
GGGAATATTC CCTTTGCCTT CTTGCCTGCG TTGATGTTTG TGTTAGCGGG TCTAACGGCG
TTTTCTACCG GCACCAGTTG GGGCACGTTC GGCATTATGC TGCCGATTGC CGCCGATATG
GCGATGGGTA GCCATACGGC CATGATGTTA CCTATGCTAG CTTCAGTATT GGCGGGCGCG
GTATTTGGTG ATCACTGTTC ACCGATTTCG GATACCACGA TTTTGTCGTC AACCGGCGCG
AGCTGCCACC ATATCGACCA CGTTGTGACT CAGCTGCCTT ACGCAGTGAT AGTGGCGCTG
ATCAGCATGG TGGGTTATGT GGTGCTTGGC TTTACTGAAT CAGTCAATGC GGGGCTGCTG
ACCTGTAGTG TATTGTTTGT GTTGACTATC ATTGGTTTGC AAATTAAATC AAGAAGTTTG
GCGAAATAA
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| Protein sequence | MTVVSYADSA LSLLPPVVAI VLAIFTRRVL LSLGLGIVIG VLLLNQFSPV ASGEFLVNSV
KGLFWSEDGV NSWNLYILGF LIVLGMITAL ITVSGSARAF ADWARLHIRN KRDAKLLTMF
LGCVVFIDDY FNSLVVGSVA RPVTDRYYIS RAKLAYLLDS TAAPVCVISP VSSWGAYIIA
LIGGILTAHG FADSGHLSVF IQMIPMNFYA IFSLLLLLCV AFMGLDIGPM REHELNAQRG
NLYDENKGLP PGANADLPEA ETGKILGLFL PITVLVFATL YFMIDSGAQV LAKEGIEFNI
ISAFEKTDVS SSLFFGALIG LAVALVLNLV QGVEKSMVVK GIVQGARSML PAIYILLFAW
TIAGVIGQLE TGKFMASLAT GNIPFAFLPA LMFVLAGLTA FSTGTSWGTF GIMLPIAADM
AMGSHTAMML PMLASVLAGA VFGDHCSPIS DTTILSSTGA SCHHIDHVVT QLPYAVIVAL
ISMVGYVVLG FTESVNAGLL TCSVLFVLTI IGLQIKSRSL AK
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