| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1280 |
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| Symbol | |
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| ID | 4251213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1487344 |
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| End bp | 1488684 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117865 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_733416 |
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| Protein GI | 113969623 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG CCAAATTACT CTTAGTCGAA GACGATGCGT CCCTGCGTGA GGCTTTGCTC
GATACCTTAA TGTTGGCGCA ATACGACTGC ATCGATGTGG CCTCCGGCGA GGAAGCCATT
ATCGCATTGA AGCAACATCA GTTTGACTTA GTGATCAGCG ATGTGCAGAT GCAGGGCATT
GGCGGCTTAG GATTATTAAA TTACTTACAG CAGCATCACC CCAAGCTGCC AGTGTTATTG
ATGACGGCGT ATGCCACCAT TGGCAGTGCG GTCAGTGCAA TTAAATTGGG CGCCGTCGAT
TATTTGGCAA AACCCTTTGC GCCAGAGGTA TTGCTCAACC AAGTTTCCCG CTATTTGCCG
CTCAAACAAA GTAGCGATCA ACCCGTGGTT GCCGATGAAA AGAGCCTCGC GCTGCTATCA
CTGGCACAGC GTGTGGCGGC ATCCGATGCT TCTGTGATGA TCCTTGGACC AAGCGGCTCG
GGTAAAGAAG TGTTAGCCCG TTATATTCAT CAACATAGTA GCCGTGCCAA CCAAGCGTTT
GTGGCCATCA ACTGTGCGGC CATCCCCGAG AATATGCTCG AGGCGACCTT ATTCGGTTAT
GAAAAAGGGG CTTTTACCGG CGCTTATCAG GCATGCCCTG GTAAATTTGA ACAGGCACAA
GGCGGCACCT TATTACTCGA TGAAATATCT GAGATGGATT TGGGACTTCA GGCCAAACTG
CTGCGTGTGC TGCAAGAGCG CGAAGTGGAG CGTTTAGGCG GTCGTAAAAC CATTAAGTTA
GATGTTCGGG TGCTTGCCAC TTCGAATCGG GATTTAAAGG CCGTGGTTGC CGCTGGGCAA
TTCCGAGAAG ATCTCTATTA TCGCATTAAC GTGTTTCCAC TGACGTGGCC TGCACTGAAT
CAACGCCCTG CGGATATTTT GCCACTAGCT CGGCATTTAC TTGCGAAACA CGCAAAGGCG
CTAAATGTGC TTGATTTACC TGAGTTTGAT GAGGCAGCTT GTCGTCGTTT ACTCAGTCAC
CGCTGGCCAG GTAATGTGCG CGAGTTGGAT AACGTGGTGC AACGCGCGTT AATTTTACGT
GCTGGGGCTG TGATTACCGC CAACGATATT ATTATCGATG CCCAAGATGT GCCTCTGTTA
TCCGATGACG CCGAATATGT CAATGAGCCG GAAGGTTTAG GTGAGGAGTT GAAGGCGCAG
GAACATGTGA TCATTCTCGA AACTTTAGCG CAATGCCAAG GTAGTCGTAA GTTGGTTGCC
GAAAAACTTG GGATCAGTGC GCGCACCTTA AGATATAAGA TGGCCAGAAT GCGCGATATG
GGGATTCAAT TGCCCAACTA A
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| Protein sequence | MSEAKLLLVE DDASLREALL DTLMLAQYDC IDVASGEEAI IALKQHQFDL VISDVQMQGI
GGLGLLNYLQ QHHPKLPVLL MTAYATIGSA VSAIKLGAVD YLAKPFAPEV LLNQVSRYLP
LKQSSDQPVV ADEKSLALLS LAQRVAASDA SVMILGPSGS GKEVLARYIH QHSSRANQAF
VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMDLGLQAKL
LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAVVAAGQ FREDLYYRIN VFPLTWPALN
QRPADILPLA RHLLAKHAKA LNVLDLPEFD EAACRRLLSH RWPGNVRELD NVVQRALILR
AGAVITANDI IIDAQDVPLL SDDAEYVNEP EGLGEELKAQ EHVIILETLA QCQGSRKLVA
EKLGISARTL RYKMARMRDM GIQLPN
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